Comparative Inference of Duplicated Genes Produced by Polyploidization in Soybean Genome
Soybean (Glycine max) is one of the most important crop plants for providing protein and oil. It is important to investigate soybean genome for its economic and scientific value. Polyploidy is a widespread and recursive phenomenon during plant evolution, and it could generate massive duplicated gene...
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| Format: | Article |
| Language: | English |
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Wiley
2013-01-01
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| Series: | International Journal of Genomics |
| Online Access: | http://dx.doi.org/10.1155/2013/275616 |
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| _version_ | 1832554054906019840 |
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| author | Yanmei Yang Jinpeng Wang Jianyong Di |
| author_facet | Yanmei Yang Jinpeng Wang Jianyong Di |
| author_sort | Yanmei Yang |
| collection | DOAJ |
| description | Soybean (Glycine max) is one of the most important crop plants for providing protein and oil. It is important to investigate soybean genome for its economic and scientific value. Polyploidy is a widespread and recursive phenomenon during plant evolution, and it could generate massive duplicated genes which is an important resource for genetic innovation. Improved sequence alignment criteria and statistical analysis are used to identify and characterize duplicated genes produced by polyploidization in soybean. Based on the collinearity method, duplicated genes by whole genome duplication account for 70.3% in soybean. From the statistical analysis of the molecular distances between duplicated genes, our study indicates that the whole genome duplication event occurred more than once in the genome evolution of soybean, which is often distributed near the ends of chromosomes. |
| format | Article |
| id | doaj-art-f805e7f4877249eaaf4d66f3f8078569 |
| institution | Kabale University |
| issn | 2314-436X 2314-4378 |
| language | English |
| publishDate | 2013-01-01 |
| publisher | Wiley |
| record_format | Article |
| series | International Journal of Genomics |
| spelling | doaj-art-f805e7f4877249eaaf4d66f3f80785692025-02-03T05:52:33ZengWileyInternational Journal of Genomics2314-436X2314-43782013-01-01201310.1155/2013/275616275616Comparative Inference of Duplicated Genes Produced by Polyploidization in Soybean GenomeYanmei Yang0Jinpeng Wang1Jianyong Di2College of Science, Hebei United University, Tangshan, Hebei 063009, ChinaCenter for Genomics and Computational Biology, School of Life Sciences, Hebei United University, Tangshan, Hebei 063009, ChinaCollege of Science, Hebei United University, Tangshan, Hebei 063009, ChinaSoybean (Glycine max) is one of the most important crop plants for providing protein and oil. It is important to investigate soybean genome for its economic and scientific value. Polyploidy is a widespread and recursive phenomenon during plant evolution, and it could generate massive duplicated genes which is an important resource for genetic innovation. Improved sequence alignment criteria and statistical analysis are used to identify and characterize duplicated genes produced by polyploidization in soybean. Based on the collinearity method, duplicated genes by whole genome duplication account for 70.3% in soybean. From the statistical analysis of the molecular distances between duplicated genes, our study indicates that the whole genome duplication event occurred more than once in the genome evolution of soybean, which is often distributed near the ends of chromosomes.http://dx.doi.org/10.1155/2013/275616 |
| spellingShingle | Yanmei Yang Jinpeng Wang Jianyong Di Comparative Inference of Duplicated Genes Produced by Polyploidization in Soybean Genome International Journal of Genomics |
| title | Comparative Inference of Duplicated Genes Produced by Polyploidization in Soybean Genome |
| title_full | Comparative Inference of Duplicated Genes Produced by Polyploidization in Soybean Genome |
| title_fullStr | Comparative Inference of Duplicated Genes Produced by Polyploidization in Soybean Genome |
| title_full_unstemmed | Comparative Inference of Duplicated Genes Produced by Polyploidization in Soybean Genome |
| title_short | Comparative Inference of Duplicated Genes Produced by Polyploidization in Soybean Genome |
| title_sort | comparative inference of duplicated genes produced by polyploidization in soybean genome |
| url | http://dx.doi.org/10.1155/2013/275616 |
| work_keys_str_mv | AT yanmeiyang comparativeinferenceofduplicatedgenesproducedbypolyploidizationinsoybeangenome AT jinpengwang comparativeinferenceofduplicatedgenesproducedbypolyploidizationinsoybeangenome AT jianyongdi comparativeinferenceofduplicatedgenesproducedbypolyploidizationinsoybeangenome |