Web-Based Database and Viewer of East Asian Copy Number Variations
We have discovered copy number variations (CNVs) in 3,578 Korean individuals with the Affymetrix Genome-Wide SNP array 5.0, and 4,003 copy number variation regions (CNVRs) were defined in a previous study. To explore the details of the variants easily in related studies, we built a database, catalog...
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| Format: | Article |
| Language: | English |
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BioMed Central
2012-03-01
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| Series: | Genomics & Informatics |
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| Online Access: | http://genominfo.org/upload/pdf/gni-10-65.pdf |
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| author | Ji-Hong Kim Hae-Jin Hu Yeun-Jun Chung |
| author_facet | Ji-Hong Kim Hae-Jin Hu Yeun-Jun Chung |
| author_sort | Ji-Hong Kim |
| collection | DOAJ |
| description | We have discovered copy number variations (CNVs) in 3,578 Korean individuals with the Affymetrix Genome-Wide SNP array 5.0, and 4,003 copy number variation regions (CNVRs) were defined in a previous study. To explore the details of the variants easily in related studies, we built a database, cataloging the CNVs and related information. This system helps researchers browsing these variants with gene and structure variant annotations. Users can easily find specific regions with search options and verify them from system-integrated genome browsers with annotations. |
| format | Article |
| id | doaj-art-f33e952ae8aa46c4a587782b5429f88c |
| institution | Kabale University |
| issn | 1598-866X 2234-0742 |
| language | English |
| publishDate | 2012-03-01 |
| publisher | BioMed Central |
| record_format | Article |
| series | Genomics & Informatics |
| spelling | doaj-art-f33e952ae8aa46c4a587782b5429f88c2025-02-02T12:46:14ZengBioMed CentralGenomics & Informatics1598-866X2234-07422012-03-01101656710.5808/GI.2012.10.1.6533Web-Based Database and Viewer of East Asian Copy Number VariationsJi-Hong Kim0Hae-Jin Hu1Yeun-Jun Chung2Department of Microbiology, Integrated Research Center for Genome Polymorphism, The Catholic University of Korea School of Medicine, Seoul 137-701, Korea.Department of Microbiology, Integrated Research Center for Genome Polymorphism, The Catholic University of Korea School of Medicine, Seoul 137-701, Korea.Department of Microbiology, Integrated Research Center for Genome Polymorphism, The Catholic University of Korea School of Medicine, Seoul 137-701, Korea.We have discovered copy number variations (CNVs) in 3,578 Korean individuals with the Affymetrix Genome-Wide SNP array 5.0, and 4,003 copy number variation regions (CNVRs) were defined in a previous study. To explore the details of the variants easily in related studies, we built a database, cataloging the CNVs and related information. This system helps researchers browsing these variants with gene and structure variant annotations. Users can easily find specific regions with search options and verify them from system-integrated genome browsers with annotations.http://genominfo.org/upload/pdf/gni-10-65.pdfcopy number variationdatabasegenome browser |
| spellingShingle | Ji-Hong Kim Hae-Jin Hu Yeun-Jun Chung Web-Based Database and Viewer of East Asian Copy Number Variations Genomics & Informatics copy number variation database genome browser |
| title | Web-Based Database and Viewer of East Asian Copy Number Variations |
| title_full | Web-Based Database and Viewer of East Asian Copy Number Variations |
| title_fullStr | Web-Based Database and Viewer of East Asian Copy Number Variations |
| title_full_unstemmed | Web-Based Database and Viewer of East Asian Copy Number Variations |
| title_short | Web-Based Database and Viewer of East Asian Copy Number Variations |
| title_sort | web based database and viewer of east asian copy number variations |
| topic | copy number variation database genome browser |
| url | http://genominfo.org/upload/pdf/gni-10-65.pdf |
| work_keys_str_mv | AT jihongkim webbaseddatabaseandviewerofeastasiancopynumbervariations AT haejinhu webbaseddatabaseandviewerofeastasiancopynumbervariations AT yeunjunchung webbaseddatabaseandviewerofeastasiancopynumbervariations |