BioUniWA – WEB SERVICES GENERATION SYSTEM AND PIPELINES FOR UNIFIED ACCESS TO RESOURCES IN THE FIELD OF BIOINFORMATICS
We present the BioUniWA system for automatic generation of web services for unified access to resources in the field of bioinformatics. The BioUniWA system was originally designed as the BioInfoWF development system to support access to computing modules and pipelines through web services. BioUniWA...
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| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Siberian Branch of the Russian Academy of Sciences, Federal Research Center Institute of Cytology and Genetics, The Vavilov Society of Geneticists and Breeders
2015-01-01
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| Series: | Вавиловский журнал генетики и селекции |
| Subjects: | |
| Online Access: | https://vavilov.elpub.ru/jour/article/view/184 |
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| _version_ | 1832575335696171008 |
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| author | E. G. Komyshev M. A. Genaev K. V. Gunbin D. A. Afonnikov |
| author_facet | E. G. Komyshev M. A. Genaev K. V. Gunbin D. A. Afonnikov |
| author_sort | E. G. Komyshev |
| collection | DOAJ |
| description | We present the BioUniWA system for automatic generation of web services for unified access to resources in the field of bioinformatics. The BioUniWA system was originally designed as the BioInfoWF development system to support access to computing modules and pipelines through web services. BioUniWA can automatically generate web-based applications for computational modules and pipelines whose formal descriptions are defined by a language based on XML. In the future, one will be able to use these web-based applications in a variety of bioinformational systems, such as Taverna or Galaxy, as well as directly in the source code of applications to be developed. We have designed a tool that greatly simplifies the annotation of computing modules and schemes of pipelines, as well as their publication via Internet.BioUniWA is distributed under a free GNU general public license. The distribution package and user documentation are available at BioUniWA http://bioinfowf.bionet.nsc.ru. |
| format | Article |
| id | doaj-art-dfb7479fed784e56b54b57650e2aeec6 |
| institution | Kabale University |
| issn | 2500-3259 |
| language | English |
| publishDate | 2015-01-01 |
| publisher | Siberian Branch of the Russian Academy of Sciences, Federal Research Center Institute of Cytology and Genetics, The Vavilov Society of Geneticists and Breeders |
| record_format | Article |
| series | Вавиловский журнал генетики и селекции |
| spelling | doaj-art-dfb7479fed784e56b54b57650e2aeec62025-02-01T09:58:00ZengSiberian Branch of the Russian Academy of Sciences, Federal Research Center Institute of Cytology and Genetics, The Vavilov Society of Geneticists and BreedersВавиловский журнал генетики и селекции2500-32592015-01-01174/1607614168BioUniWA – WEB SERVICES GENERATION SYSTEM AND PIPELINES FOR UNIFIED ACCESS TO RESOURCES IN THE FIELD OF BIOINFORMATICSE. G. Komyshev0M. A. Genaev1K. V. Gunbin2D. A. Afonnikov3Novosibirsk National Research State University, Novosibirsk, Russia Institute of Cytology and Genetics SB RAS, Novosibirsk, RussiaInstitute of Cytology and Genetics SB RAS, Novosibirsk, RussiaInstitute of Cytology and Genetics SB RAS, Novosibirsk, RussiaNovosibirsk National Research State University, Novosibirsk, Russia Institute of Cytology and Genetics SB RAS, Novosibirsk, RussiaWe present the BioUniWA system for automatic generation of web services for unified access to resources in the field of bioinformatics. The BioUniWA system was originally designed as the BioInfoWF development system to support access to computing modules and pipelines through web services. BioUniWA can automatically generate web-based applications for computational modules and pipelines whose formal descriptions are defined by a language based on XML. In the future, one will be able to use these web-based applications in a variety of bioinformational systems, such as Taverna or Galaxy, as well as directly in the source code of applications to be developed. We have designed a tool that greatly simplifies the annotation of computing modules and schemes of pipelines, as well as their publication via Internet.BioUniWA is distributed under a free GNU general public license. The distribution package and user documentation are available at BioUniWA http://bioinfowf.bionet.nsc.ru.https://vavilov.elpub.ru/jour/article/view/184biouniwaunification of accessdata integrationpipelined data processingdescriptions of computational modulesweb interfaceweb servicesbioinformatics |
| spellingShingle | E. G. Komyshev M. A. Genaev K. V. Gunbin D. A. Afonnikov BioUniWA – WEB SERVICES GENERATION SYSTEM AND PIPELINES FOR UNIFIED ACCESS TO RESOURCES IN THE FIELD OF BIOINFORMATICS Вавиловский журнал генетики и селекции biouniwa unification of access data integration pipelined data processing descriptions of computational modules web interface web services bioinformatics |
| title | BioUniWA – WEB SERVICES GENERATION SYSTEM AND PIPELINES FOR UNIFIED ACCESS TO RESOURCES IN THE FIELD OF BIOINFORMATICS |
| title_full | BioUniWA – WEB SERVICES GENERATION SYSTEM AND PIPELINES FOR UNIFIED ACCESS TO RESOURCES IN THE FIELD OF BIOINFORMATICS |
| title_fullStr | BioUniWA – WEB SERVICES GENERATION SYSTEM AND PIPELINES FOR UNIFIED ACCESS TO RESOURCES IN THE FIELD OF BIOINFORMATICS |
| title_full_unstemmed | BioUniWA – WEB SERVICES GENERATION SYSTEM AND PIPELINES FOR UNIFIED ACCESS TO RESOURCES IN THE FIELD OF BIOINFORMATICS |
| title_short | BioUniWA – WEB SERVICES GENERATION SYSTEM AND PIPELINES FOR UNIFIED ACCESS TO RESOURCES IN THE FIELD OF BIOINFORMATICS |
| title_sort | biouniwa web services generation system and pipelines for unified access to resources in the field of bioinformatics |
| topic | biouniwa unification of access data integration pipelined data processing descriptions of computational modules web interface web services bioinformatics |
| url | https://vavilov.elpub.ru/jour/article/view/184 |
| work_keys_str_mv | AT egkomyshev biouniwawebservicesgenerationsystemandpipelinesforunifiedaccesstoresourcesinthefieldofbioinformatics AT magenaev biouniwawebservicesgenerationsystemandpipelinesforunifiedaccesstoresourcesinthefieldofbioinformatics AT kvgunbin biouniwawebservicesgenerationsystemandpipelinesforunifiedaccesstoresourcesinthefieldofbioinformatics AT daafonnikov biouniwawebservicesgenerationsystemandpipelinesforunifiedaccesstoresourcesinthefieldofbioinformatics |