Chromosome level genome assembly and annotation of the Swanson rainbow trout homozygous line

Abstract The genome of the Swanson doubled haploid (DH) YY male line of rainbow trout was de novo assembled using the Canu pipeline, high-coverage PacBio long-read sequence data, Bionano optical maps, and Hi-C proximity ligation sequence data, resulting in 29 major scaffolds aligning with the karyot...

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Bibliographic Details
Main Authors: Ali Ali, Guangtu Gao, Rafet Al-Tobasei, Ramey C. Youngblood, Geoffrey C. Waldbieser, Brian E. Scheffler, Yniv Palti, Mohamed Salem
Format: Article
Language:English
Published: Nature Portfolio 2025-02-01
Series:Scientific Data
Online Access:https://doi.org/10.1038/s41597-025-04693-7
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