A non-hypothesis-driven practical laboratory activity on functional metagenomics: “fishing” protein-coding DNA sequences from microbiomes

A non-hypothesis-driven practical laboratory activity on functional metagenomics: “fishing” protein-coding DNA sequences from microbiomes

Practical laboratory of the most functional metagenomics courses focuses on activities aimed at providing specific skills in bioinformatics through the analysis of genomic datasets. However, sequence-based analyses of metagenomes should be complemented by function-based analyses, to provide evidenti...

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Main Authors: Melissa Morra, Denise Marradi, Luca Gandini, Vittorio Ivagnes, Giulia Ottolini, Alessandro Bovio, Grace Jabali, Lorenzo Maraschi, Ifeoluwa Ayomide Dada, Tonderai Vitalis Chawanda, Martina Gorla, Olga Tarasiuk, Chiara Mocchetti, Maria Felicia Soluri, Francesca Boccafoschi, Daniele Sblattero, Diego Cotella
Format: Article
Language:English
Published: Frontiers Media S.A. 2025-05-01
Series:Frontiers in Bioengineering and Biotechnology
Subjects:
open reading frame
domainome
microbiome
course-based undergraduate research experience
synthetic biology
Online Access:https://www.frontiersin.org/articles/10.3389/fbioe.2025.1602982/full
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https://www.frontiersin.org/articles/10.3389/fbioe.2025.1602982/full

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