Acinetobacter baumannii represses type VI secretion system through a manganese-dependent small RNA-mediated regulation

ABSTRACT Type VI secretion system (T6SS) is utilized by many Gram-negative bacteria to eliminate competing bacterial species and manipulate host cells. Acinetobacter baumannii ATCC 17978 utilizes T6SS at the expense of losing pAB3 plasmid to induce contact-dependent killing of competitor microbes, r...

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Main Authors: Somok Bhowmik, Avik Pathak, Shivam Pandey, Kuldip Devnath, Abhiroop Sett, Nishant Jyoti, Timsy Bhando, Jawed Akhter, Saurabh Chugh, Ramandeep Singh, Tarun Kumar Sharma, Ranjana Pathania
Format: Article
Language:English
Published: American Society for Microbiology 2025-02-01
Series:mBio
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Online Access:https://journals.asm.org/doi/10.1128/mbio.03025-24
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author Somok Bhowmik
Avik Pathak
Shivam Pandey
Kuldip Devnath
Abhiroop Sett
Nishant Jyoti
Timsy Bhando
Jawed Akhter
Saurabh Chugh
Ramandeep Singh
Tarun Kumar Sharma
Ranjana Pathania
author_facet Somok Bhowmik
Avik Pathak
Shivam Pandey
Kuldip Devnath
Abhiroop Sett
Nishant Jyoti
Timsy Bhando
Jawed Akhter
Saurabh Chugh
Ramandeep Singh
Tarun Kumar Sharma
Ranjana Pathania
author_sort Somok Bhowmik
collection DOAJ
description ABSTRACT Type VI secretion system (T6SS) is utilized by many Gram-negative bacteria to eliminate competing bacterial species and manipulate host cells. Acinetobacter baumannii ATCC 17978 utilizes T6SS at the expense of losing pAB3 plasmid to induce contact-dependent killing of competitor microbes, resulting in the loss of antibiotic resistance carried by pAB3. However, the regulatory network associated with T6SS in A. baumannii remains poorly understood. Here, we identified an Mn2+-dependent post-transcriptional regulation of T6SS mediated by a bonafide small RNA, AbsR28. A. baumannii utilizes MumT, an Mn2+-uptake inner membrane transporter, for the uptake of extracellular Mn2+ during oxidative stress. We demonstrate that the abundance of intracellular Mn2+ enables complementary base pairing of AbsR28-tssM mRNA (that translates to TssM, one of the vital inner membrane components of T6SS), inducing RNase E-mediated degradation of tssM mRNA and resulting in T6SS repression. Thus, AbsR28 mediates a crosstalk between MumT and T6SS in A. baumannii.IMPORTANCESmall RNAs (sRNAs) are identified as critical components within the bacterial regulatory networks involved in fine regulation of virulence-associated factors. The sRNA-mediated regulation of type VI secretion system (T6SS) in Acinetobacter baumannii was unchartered. Previously, it was demonstrated that A. baumannii ATCC 17978 cells switch from T6− to T6+ phenotype, resulting in the loss of antibiotic resistance conferred by plasmid pAB3. Furthermore, the derivatives of pAB3 found in recent clinical isolates of A. baumannii harbor expanded antibiotic resistance genes and multiple determinants for virulence factors. Hence, the loss of this plasmid for T6SS activity renders A. baumannii T6+ cells susceptible to antibiotics and compromises their virulence. Our findings show how A. baumannii tends to inactivate T6SS through an sRNA-mediated regulation that relies on Mn2+ and retains pAB3 during infection to retain antibiotic resistance genes carried on the plasmid.
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spelling doaj-art-c45cf7e026134e4092450f00ec8f3ba62025-02-05T14:00:47ZengAmerican Society for MicrobiologymBio2150-75112025-02-0116210.1128/mbio.03025-24Acinetobacter baumannii represses type VI secretion system through a manganese-dependent small RNA-mediated regulationSomok Bhowmik0Avik Pathak1Shivam Pandey2Kuldip Devnath3Abhiroop Sett4Nishant Jyoti5Timsy Bhando6Jawed Akhter7Saurabh Chugh8Ramandeep Singh9Tarun Kumar Sharma10Ranjana Pathania11Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee, Uttarakhand, IndiaDepartment of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee, Uttarakhand, IndiaDepartment of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee, Uttarakhand, IndiaDepartment of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee, Uttarakhand, IndiaDepartment of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee, Uttarakhand, IndiaDepartment of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee, Uttarakhand, IndiaDepartment of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee, Uttarakhand, IndiaDepartment of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee, Uttarakhand, IndiaTranslational Health Science and Technology Institute, Faridabad, Haryana, IndiaTranslational Health Science and Technology Institute, Faridabad, Haryana, IndiaTranslational Health Science and Technology Institute, Faridabad, Haryana, IndiaDepartment of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee, Uttarakhand, IndiaABSTRACT Type VI secretion system (T6SS) is utilized by many Gram-negative bacteria to eliminate competing bacterial species and manipulate host cells. Acinetobacter baumannii ATCC 17978 utilizes T6SS at the expense of losing pAB3 plasmid to induce contact-dependent killing of competitor microbes, resulting in the loss of antibiotic resistance carried by pAB3. However, the regulatory network associated with T6SS in A. baumannii remains poorly understood. Here, we identified an Mn2+-dependent post-transcriptional regulation of T6SS mediated by a bonafide small RNA, AbsR28. A. baumannii utilizes MumT, an Mn2+-uptake inner membrane transporter, for the uptake of extracellular Mn2+ during oxidative stress. We demonstrate that the abundance of intracellular Mn2+ enables complementary base pairing of AbsR28-tssM mRNA (that translates to TssM, one of the vital inner membrane components of T6SS), inducing RNase E-mediated degradation of tssM mRNA and resulting in T6SS repression. Thus, AbsR28 mediates a crosstalk between MumT and T6SS in A. baumannii.IMPORTANCESmall RNAs (sRNAs) are identified as critical components within the bacterial regulatory networks involved in fine regulation of virulence-associated factors. The sRNA-mediated regulation of type VI secretion system (T6SS) in Acinetobacter baumannii was unchartered. Previously, it was demonstrated that A. baumannii ATCC 17978 cells switch from T6− to T6+ phenotype, resulting in the loss of antibiotic resistance conferred by plasmid pAB3. Furthermore, the derivatives of pAB3 found in recent clinical isolates of A. baumannii harbor expanded antibiotic resistance genes and multiple determinants for virulence factors. Hence, the loss of this plasmid for T6SS activity renders A. baumannii T6+ cells susceptible to antibiotics and compromises their virulence. Our findings show how A. baumannii tends to inactivate T6SS through an sRNA-mediated regulation that relies on Mn2+ and retains pAB3 during infection to retain antibiotic resistance genes carried on the plasmid.https://journals.asm.org/doi/10.1128/mbio.03025-24Mn2+oxidative stresspost-transcriptional regulationsmall RNAT6SS
spellingShingle Somok Bhowmik
Avik Pathak
Shivam Pandey
Kuldip Devnath
Abhiroop Sett
Nishant Jyoti
Timsy Bhando
Jawed Akhter
Saurabh Chugh
Ramandeep Singh
Tarun Kumar Sharma
Ranjana Pathania
Acinetobacter baumannii represses type VI secretion system through a manganese-dependent small RNA-mediated regulation
mBio
Mn2+
oxidative stress
post-transcriptional regulation
small RNA
T6SS
title Acinetobacter baumannii represses type VI secretion system through a manganese-dependent small RNA-mediated regulation
title_full Acinetobacter baumannii represses type VI secretion system through a manganese-dependent small RNA-mediated regulation
title_fullStr Acinetobacter baumannii represses type VI secretion system through a manganese-dependent small RNA-mediated regulation
title_full_unstemmed Acinetobacter baumannii represses type VI secretion system through a manganese-dependent small RNA-mediated regulation
title_short Acinetobacter baumannii represses type VI secretion system through a manganese-dependent small RNA-mediated regulation
title_sort acinetobacter baumannii represses type vi secretion system through a manganese dependent small rna mediated regulation
topic Mn2+
oxidative stress
post-transcriptional regulation
small RNA
T6SS
url https://journals.asm.org/doi/10.1128/mbio.03025-24
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