Computer analysis of co-localization of transcription factor binding sites in genome by ChIP-seq data

Computer analysis of co-localization of transcription factor binding sites in genome by ChIP-seq data

Statistical features of the distribution of transcription factor binding sites in the mouse genome that are obtained by ChIP-seq experiments in embryonic stem cells have been considered. Clusters of sites that contain four or more different transcription factor binding sites in the mouse genome have...

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Bibliographic Details
Main Authors: A. I. Dergilev, A. M. Spitsina, I. V. Chadaeva, A. V. Svichkarev, F. M. Naumenko, E. V. Kulakova, E. R. Galieva, E. E. Vityaev, M. Chen, Y. L. Orlov
Format: Article
Language:English
Published: Siberian Branch of the Russian Academy of Sciences, Federal Research Center Institute of Cytology and Genetics, The Vavilov Society of Geneticists and Breeders 2017-02-01
Series:Вавиловский журнал генетики и селекции
Subjects:
transcription factor binding sites
embryonic stem cells
data mining
regularity discovery
chip-seq
enhancers.
Online Access:https://vavilov.elpub.ru/jour/article/view/850
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