Challenges in adjusting scoring matrices when comparing functional motifs with non-standard compositions

Abstract Methods for scoring matrix adjustment decrease the significance of biased residues to better detect homology between protein sequences. This is because non-homologous proteins often contain fragments with non-standard compositions that are strikingly similar to each other. However, these fr...

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Bibliographic Details
Main Author: Patryk Jarnot
Format: Article
Language:English
Published: Nature Portfolio 2024-12-01
Series:Scientific Reports
Subjects:
Online Access:https://doi.org/10.1038/s41598-024-82548-8
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