A metal-trap tests and refines blueprints to engineer cellular protein metalation with different elements

Abstract It has been challenging to test how proteins acquire specific metals in cells. The speciation of metalation is thought to depend on the preferences of proteins for different metals competing at intracellular metal-availabilities. This implies mis-metalation may occur if proteins become mis-...

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Main Authors: Sophie E. Clough, Tessa R. Young, Emma Tarrant, Andrew J. P. Scott, Peter T. Chivers, Arthur Glasfeld, Nigel J. Robinson
Format: Article
Language:English
Published: Nature Portfolio 2025-01-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-025-56199-w
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author Sophie E. Clough
Tessa R. Young
Emma Tarrant
Andrew J. P. Scott
Peter T. Chivers
Arthur Glasfeld
Nigel J. Robinson
author_facet Sophie E. Clough
Tessa R. Young
Emma Tarrant
Andrew J. P. Scott
Peter T. Chivers
Arthur Glasfeld
Nigel J. Robinson
author_sort Sophie E. Clough
collection DOAJ
description Abstract It has been challenging to test how proteins acquire specific metals in cells. The speciation of metalation is thought to depend on the preferences of proteins for different metals competing at intracellular metal-availabilities. This implies mis-metalation may occur if proteins become mis-matched to metal-availabilities in heterologous cells. Here we use a cyanobacterial MnII-cupin (MncA) as a metal trap, to test predictions of metalation. By re-folding MncA in buffered competing metals, metal-preferences are determined. Relating metal-preferences to metal-availabilities estimated using cellular metal sensors, predicts mis-metalation of MncA with FeII in E. coli. After expression in E. coli, predominantly FeII-bound MncA is isolated experimentally. It is predicted that in metal-supplemented viable cells metal-MncA speciation should switch. MnII-, CoII-, or NiII-MncA are recovered from the respective metal-supplemented cells. Differences between observed and predicted metal-MncA speciation are used to refine estimated metal availabilities. Values are provided as blueprints to guide engineering biological protein metalation.
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spelling doaj-art-b5e6def0f9d4465ba16da85d665a013f2025-01-19T12:32:13ZengNature PortfolioNature Communications2041-17232025-01-0116111510.1038/s41467-025-56199-wA metal-trap tests and refines blueprints to engineer cellular protein metalation with different elementsSophie E. Clough0Tessa R. Young1Emma Tarrant2Andrew J. P. Scott3Peter T. Chivers4Arthur Glasfeld5Nigel J. Robinson6Department of Biosciences, University of DurhamDepartment of Biosciences, University of DurhamDepartment of Biosciences, University of DurhamDepartment of Biosciences, University of DurhamDepartment of Biosciences, University of DurhamDepartment of Biosciences, University of DurhamDepartment of Biosciences, University of DurhamAbstract It has been challenging to test how proteins acquire specific metals in cells. The speciation of metalation is thought to depend on the preferences of proteins for different metals competing at intracellular metal-availabilities. This implies mis-metalation may occur if proteins become mis-matched to metal-availabilities in heterologous cells. Here we use a cyanobacterial MnII-cupin (MncA) as a metal trap, to test predictions of metalation. By re-folding MncA in buffered competing metals, metal-preferences are determined. Relating metal-preferences to metal-availabilities estimated using cellular metal sensors, predicts mis-metalation of MncA with FeII in E. coli. After expression in E. coli, predominantly FeII-bound MncA is isolated experimentally. It is predicted that in metal-supplemented viable cells metal-MncA speciation should switch. MnII-, CoII-, or NiII-MncA are recovered from the respective metal-supplemented cells. Differences between observed and predicted metal-MncA speciation are used to refine estimated metal availabilities. Values are provided as blueprints to guide engineering biological protein metalation.https://doi.org/10.1038/s41467-025-56199-w
spellingShingle Sophie E. Clough
Tessa R. Young
Emma Tarrant
Andrew J. P. Scott
Peter T. Chivers
Arthur Glasfeld
Nigel J. Robinson
A metal-trap tests and refines blueprints to engineer cellular protein metalation with different elements
Nature Communications
title A metal-trap tests and refines blueprints to engineer cellular protein metalation with different elements
title_full A metal-trap tests and refines blueprints to engineer cellular protein metalation with different elements
title_fullStr A metal-trap tests and refines blueprints to engineer cellular protein metalation with different elements
title_full_unstemmed A metal-trap tests and refines blueprints to engineer cellular protein metalation with different elements
title_short A metal-trap tests and refines blueprints to engineer cellular protein metalation with different elements
title_sort metal trap tests and refines blueprints to engineer cellular protein metalation with different elements
url https://doi.org/10.1038/s41467-025-56199-w
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