H3K9 post-translational modifications regulate epiblast/primitive endoderm specification in rabbit blastocysts

Abstract Post-translational modifications of histone H3 on lysine 9, specifically acetylation (H3K9ac) and tri-methylation (H3K9me3), play a critical role in regulating chromatin accessibility. However, the role of these modifications in lineage segregation in the mammalian blastocyst remains poorly...

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Main Authors: Wilhelm Bouchereau, Hong-Thu Pham, Worawalan Samruan, Van-Hong Vu, Thierry Joly, Marielle Afanassieff, Pierre Savatier, Rangsun Parnpai, Nathalie Beaujean
Format: Article
Language:English
Published: BMC 2025-01-01
Series:Epigenetics & Chromatin
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Online Access:https://doi.org/10.1186/s13072-025-00568-8
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author Wilhelm Bouchereau
Hong-Thu Pham
Worawalan Samruan
Van-Hong Vu
Thierry Joly
Marielle Afanassieff
Pierre Savatier
Rangsun Parnpai
Nathalie Beaujean
author_facet Wilhelm Bouchereau
Hong-Thu Pham
Worawalan Samruan
Van-Hong Vu
Thierry Joly
Marielle Afanassieff
Pierre Savatier
Rangsun Parnpai
Nathalie Beaujean
author_sort Wilhelm Bouchereau
collection DOAJ
description Abstract Post-translational modifications of histone H3 on lysine 9, specifically acetylation (H3K9ac) and tri-methylation (H3K9me3), play a critical role in regulating chromatin accessibility. However, the role of these modifications in lineage segregation in the mammalian blastocyst remains poorly understood. We demonstrate that di- and tri-methylation marks, H3K9me2 and H3K9me3, decrease during cavitation and expansion of the rabbit blastocyst. Notably, H3K9me3 levels are particularly low in inner cell mass cells at the onset of blastocyst formation but increase again just before gastrulation. Conversely, H3K9ac is abundant in early blastocyst stages but decreases during the transition from the inner cell mass to the epiblast. These distinct distribution patterns correlate with high expression levels of methyltransferases (EHMT1, EHMT2, SETDB1) and deacetylases (HDAC1, HDAC2, HDAC5) in expanding blastocysts. Functionally, inhibiting H3K9me2/3 through an EHMT1/2 inhibitor disrupts primitive endoderm segregation, whereas enhancing histone acetylation (including H3K9ac) using a class I HDAC inhibitor promotes epiblast expansion at the expense of the primitive endoderm. These modifications impact the expression of genes associated with pluripotency and lineage determination, underscoring the importance of H3K9 modifications in embryonic cell fate decisions.
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spelling doaj-art-ac7b846d70994ab1b68828b080fb338a2025-01-19T12:39:04ZengBMCEpigenetics & Chromatin1756-89352025-01-0118111610.1186/s13072-025-00568-8H3K9 post-translational modifications regulate epiblast/primitive endoderm specification in rabbit blastocystsWilhelm Bouchereau0Hong-Thu Pham1Worawalan Samruan2Van-Hong Vu3Thierry Joly4Marielle Afanassieff5Pierre Savatier6Rangsun Parnpai7Nathalie Beaujean8Univ Lyon, Université Lyon 1, INSERM, Stem Cell and Brain Research Institute U1208, INRAE USC 1361Univ Lyon, Université Lyon 1, INSERM, Stem Cell and Brain Research Institute U1208, INRAE USC 1361Univ Lyon, Université Lyon 1, INSERM, Stem Cell and Brain Research Institute U1208, INRAE USC 1361Univ Lyon, Université Lyon 1, INSERM, Stem Cell and Brain Research Institute U1208, INRAE USC 1361Université de Lyon, VetAgro Sup, Interactions Cellules Environnement (ICE)Univ Lyon, Université Lyon 1, INSERM, Stem Cell and Brain Research Institute U1208, INRAE USC 1361Univ Lyon, Université Lyon 1, INSERM, Stem Cell and Brain Research Institute U1208, INRAE USC 1361Embryo Technology and Stem Cell Research Center, School of Biotechnology, Institute of Agricultural Technology, Suranaree University of TechnologyUniv Lyon, Université Lyon 1, INSERM, Stem Cell and Brain Research Institute U1208, INRAE USC 1361Abstract Post-translational modifications of histone H3 on lysine 9, specifically acetylation (H3K9ac) and tri-methylation (H3K9me3), play a critical role in regulating chromatin accessibility. However, the role of these modifications in lineage segregation in the mammalian blastocyst remains poorly understood. We demonstrate that di- and tri-methylation marks, H3K9me2 and H3K9me3, decrease during cavitation and expansion of the rabbit blastocyst. Notably, H3K9me3 levels are particularly low in inner cell mass cells at the onset of blastocyst formation but increase again just before gastrulation. Conversely, H3K9ac is abundant in early blastocyst stages but decreases during the transition from the inner cell mass to the epiblast. These distinct distribution patterns correlate with high expression levels of methyltransferases (EHMT1, EHMT2, SETDB1) and deacetylases (HDAC1, HDAC2, HDAC5) in expanding blastocysts. Functionally, inhibiting H3K9me2/3 through an EHMT1/2 inhibitor disrupts primitive endoderm segregation, whereas enhancing histone acetylation (including H3K9ac) using a class I HDAC inhibitor promotes epiblast expansion at the expense of the primitive endoderm. These modifications impact the expression of genes associated with pluripotency and lineage determination, underscoring the importance of H3K9 modifications in embryonic cell fate decisions.https://doi.org/10.1186/s13072-025-00568-8H3K9 post-translational modificationsEmbryoEpiblastEndodermRabbitHistone deacetylase
spellingShingle Wilhelm Bouchereau
Hong-Thu Pham
Worawalan Samruan
Van-Hong Vu
Thierry Joly
Marielle Afanassieff
Pierre Savatier
Rangsun Parnpai
Nathalie Beaujean
H3K9 post-translational modifications regulate epiblast/primitive endoderm specification in rabbit blastocysts
Epigenetics & Chromatin
H3K9 post-translational modifications
Embryo
Epiblast
Endoderm
Rabbit
Histone deacetylase
title H3K9 post-translational modifications regulate epiblast/primitive endoderm specification in rabbit blastocysts
title_full H3K9 post-translational modifications regulate epiblast/primitive endoderm specification in rabbit blastocysts
title_fullStr H3K9 post-translational modifications regulate epiblast/primitive endoderm specification in rabbit blastocysts
title_full_unstemmed H3K9 post-translational modifications regulate epiblast/primitive endoderm specification in rabbit blastocysts
title_short H3K9 post-translational modifications regulate epiblast/primitive endoderm specification in rabbit blastocysts
title_sort h3k9 post translational modifications regulate epiblast primitive endoderm specification in rabbit blastocysts
topic H3K9 post-translational modifications
Embryo
Epiblast
Endoderm
Rabbit
Histone deacetylase
url https://doi.org/10.1186/s13072-025-00568-8
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