Vispro improves imaging analysis for Visium spatial transcriptomics
Abstract Spatial transcriptomics enables spatially resolved gene expression analysis, but accompanying histology images are often degraded by fiducial markers and background regions, hindering interpretation. To address this, we introduce Vispro, an end-to-end automated image processing tool optimiz...
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| Main Authors: | Huifang Ma, Xingyuan Zhang, Yilong Qu, Anru R. Zhang, Zhicheng Ji |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
BMC
2025-06-01
|
| Series: | Genome Biology |
| Online Access: | https://doi.org/10.1186/s13059-025-03648-w |
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