Vispro improves imaging analysis for Visium spatial transcriptomics

Abstract Spatial transcriptomics enables spatially resolved gene expression analysis, but accompanying histology images are often degraded by fiducial markers and background regions, hindering interpretation. To address this, we introduce Vispro, an end-to-end automated image processing tool optimiz...

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Bibliographic Details
Main Authors: Huifang Ma, Xingyuan Zhang, Yilong Qu, Anru R. Zhang, Zhicheng Ji
Format: Article
Language:English
Published: BMC 2025-06-01
Series:Genome Biology
Online Access:https://doi.org/10.1186/s13059-025-03648-w
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