Annotation-free prediction of microbial dioxygen utilization

Annotation-free prediction of microbial dioxygen utilization

ABSTRACT Aerobes require dioxygen (O2) to grow; anaerobes do not. However, nearly all microbes—aerobes, anaerobes, and facultative organisms alike—express enzymes whose substrates include O2, if only for detoxification. This presents a challenge when trying to assess which organisms are aerobic from...

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Bibliographic Details
Main Authors: Avi I. Flamholz, Joshua E. Goldford, Philippa A. Richter, Elin M. Larsson, Adrian Jinich, Woodward W. Fischer, Dianne K. Newman
Format: Article
Language:English
Published: American Society for Microbiology 2024-10-01
Series:mSystems
Subjects:
oxygen
physiology
biogeochemistry
genome analysis
machine learning
Online Access:https://journals.asm.org/doi/10.1128/msystems.00763-24
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https://journals.asm.org/doi/10.1128/msystems.00763-24

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