The impact of software and criteria on the selection of best-fit nucleotide substitution models for molecular evolutionary genetic analysis.

The statistical selection of best-fit models of nucleotide substitution for multiple sequence alignments (MSAs) is routine in phylogenetics. Our analysis of model selection across three widely used phylogenetic programs (jModelTest2, ModelTest-NG, and IQ-TREE) demonstrated that the choice of program...

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Bibliographic Details
Main Authors: Xingguang Li, Olayinka Sunday Okoh, Nídia Sequeira Trovão
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2025-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0319774
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