A message passing framework for precise cell state identification with scClassify2

Abstract Cell annotation is crucial for downstream exploration. Although many approaches, spanning from classic statistics to large language models, have been developed, most of their focus is on distinct cell types and overlook sequential cell populations. Here, we propose an annotation method, scC...

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Bibliographic Details
Main Authors: Wenze Ding, Yue Cao, Xiaohang Fu, Marni Torkel, Jean Yee Hwa Yang
Format: Article
Language:English
Published: BMC 2025-08-01
Series:Genome Biology
Subjects:
Online Access:https://doi.org/10.1186/s13059-025-03722-3
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