A factor graph nested effects model to identify networks from genetic perturbations.

Complex phenotypes such as the transformation of a normal population of cells into cancerous tissue result from a series of molecular triggers gone awry. We describe a method that searches for a genetic network consistent with expression changes observed under the knock-down of a set of genes that s...

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Bibliographic Details
Main Authors: Charles J Vaske, Carrie House, Truong Luu, Bryan Frank, Chen-Hsiang Yeang, Norman H Lee, Joshua M Stuart
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2009-01-01
Series:PLoS Computational Biology
Online Access:https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1000274&type=printable
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