Technology Readiness Level of biodiversity monitoring with molecular methods – where are we on the road to routine implementation?

Human activities are causing rapid biodiversity loss across ecosystems, affecting human well-being and crucial ecosystem services. Traditional biodiversity monitoring tools cannot keep up with the increasing demands of monitoring due to their limited spatial or temporal coverage, high costs, and lac...

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Main Authors: Tiina Laamanen, Veera Norros, Petteri Vihervaara, Jacqueline Jerney, Pirkko Kortelainen, Katharina Kujala, Stefan Lambert, Janne Mäyrä, Lilja Nikula, Ida Palmroos, Mikko Tolkkinen, Kristiina Vuorio, Kristian Meissner
Format: Article
Language:English
Published: Pensoft Publishers 2025-01-01
Series:Metabarcoding and Metagenomics
Online Access:https://mbmg.pensoft.net/article/130834/download/pdf/
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author Tiina Laamanen
Veera Norros
Petteri Vihervaara
Jacqueline Jerney
Pirkko Kortelainen
Katharina Kujala
Stefan Lambert
Janne Mäyrä
Lilja Nikula
Ida Palmroos
Mikko Tolkkinen
Kristiina Vuorio
Kristian Meissner
author_facet Tiina Laamanen
Veera Norros
Petteri Vihervaara
Jacqueline Jerney
Pirkko Kortelainen
Katharina Kujala
Stefan Lambert
Janne Mäyrä
Lilja Nikula
Ida Palmroos
Mikko Tolkkinen
Kristiina Vuorio
Kristian Meissner
author_sort Tiina Laamanen
collection DOAJ
description Human activities are causing rapid biodiversity loss across ecosystems, affecting human well-being and crucial ecosystem services. Traditional biodiversity monitoring tools cannot keep up with the increasing demands of monitoring due to their limited spatial or temporal coverage, high costs, and lack of taxonomic expertise. Thus, implementation of novel molecular monitoring methods such as environmental DNA (eDNA) and DNA metabarcoding, are necessary. Molecular monitoring methods offer significant benefits for biodiversity monitoring and environmental assessment: high sensitivity and accuracy, non-invasive sampling, broad taxonomic range and cost and time efficiency. However, the diverse methodological approaches lead to poor comparability between studies and surveys, highlighting the need for standardised assessments. We used the Technology Readiness Level (TRL) framework to evaluate the maturity of molecular monitoring methods, providing a structured assessment of their readiness for routine use. In a systematic literature review, 420 articles fulfilling the study criteria were assessed and both individual studies and method categories ranked according to the TRL scale. The findings revealed a growing number of studies, particularly in aquatic environments, with most studies validating molecular technologies on a small scale but lacking large-scale system demonstrations. Aquatic eDNA-based methods targeting fish showed overall higher technology readiness compared to other sample types and taxa and applications of molecular monitoring methods ranked into the highest TRL were predominantly freshwater studies. Key barriers to the broader implementation of molecular methods to monitoring include the need for international standards, better quantitative estimates and comprehensive reference libraries. National and international cooperation is crucial for establishing common standards, ensuring reliable and comparable results and expediting the routine use of molecular methods in biodiversity monitoring. Recent efforts towards international standardisation are encouraging, but further coordinated actions are necessary for the global implementation and acceptance of these methods.
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spelling doaj-art-353c34deb8dd4324af8f92d678154e3c2025-02-01T08:30:51ZengPensoft PublishersMetabarcoding and Metagenomics2534-97082025-01-019718910.3897/mbmg.9.130834130834Technology Readiness Level of biodiversity monitoring with molecular methods – where are we on the road to routine implementation?Tiina Laamanen0Veera Norros1Petteri Vihervaara2Jacqueline Jerney3Pirkko Kortelainen4Katharina Kujala5Stefan Lambert6Janne Mäyrä7Lilja Nikula8Ida Palmroos9Mikko Tolkkinen10Kristiina Vuorio11Kristian Meissner12University of OuluFinnish Environment Institute SykeFinnish Environment Institute Sykeeb&p Umweltbüro GmbHFinnish Environment Institute SykeUniversity of OuluUniversity of OuluFinnish Environment Institute SykeUniversity of HelsinkiMinistry of the EnvironmentMetsähallitusFinnish Environment Institute SykeFinnish Environment Institute SykeHuman activities are causing rapid biodiversity loss across ecosystems, affecting human well-being and crucial ecosystem services. Traditional biodiversity monitoring tools cannot keep up with the increasing demands of monitoring due to their limited spatial or temporal coverage, high costs, and lack of taxonomic expertise. Thus, implementation of novel molecular monitoring methods such as environmental DNA (eDNA) and DNA metabarcoding, are necessary. Molecular monitoring methods offer significant benefits for biodiversity monitoring and environmental assessment: high sensitivity and accuracy, non-invasive sampling, broad taxonomic range and cost and time efficiency. However, the diverse methodological approaches lead to poor comparability between studies and surveys, highlighting the need for standardised assessments. We used the Technology Readiness Level (TRL) framework to evaluate the maturity of molecular monitoring methods, providing a structured assessment of their readiness for routine use. In a systematic literature review, 420 articles fulfilling the study criteria were assessed and both individual studies and method categories ranked according to the TRL scale. The findings revealed a growing number of studies, particularly in aquatic environments, with most studies validating molecular technologies on a small scale but lacking large-scale system demonstrations. Aquatic eDNA-based methods targeting fish showed overall higher technology readiness compared to other sample types and taxa and applications of molecular monitoring methods ranked into the highest TRL were predominantly freshwater studies. Key barriers to the broader implementation of molecular methods to monitoring include the need for international standards, better quantitative estimates and comprehensive reference libraries. National and international cooperation is crucial for establishing common standards, ensuring reliable and comparable results and expediting the routine use of molecular methods in biodiversity monitoring. Recent efforts towards international standardisation are encouraging, but further coordinated actions are necessary for the global implementation and acceptance of these methods.https://mbmg.pensoft.net/article/130834/download/pdf/
spellingShingle Tiina Laamanen
Veera Norros
Petteri Vihervaara
Jacqueline Jerney
Pirkko Kortelainen
Katharina Kujala
Stefan Lambert
Janne Mäyrä
Lilja Nikula
Ida Palmroos
Mikko Tolkkinen
Kristiina Vuorio
Kristian Meissner
Technology Readiness Level of biodiversity monitoring with molecular methods – where are we on the road to routine implementation?
Metabarcoding and Metagenomics
title Technology Readiness Level of biodiversity monitoring with molecular methods – where are we on the road to routine implementation?
title_full Technology Readiness Level of biodiversity monitoring with molecular methods – where are we on the road to routine implementation?
title_fullStr Technology Readiness Level of biodiversity monitoring with molecular methods – where are we on the road to routine implementation?
title_full_unstemmed Technology Readiness Level of biodiversity monitoring with molecular methods – where are we on the road to routine implementation?
title_short Technology Readiness Level of biodiversity monitoring with molecular methods – where are we on the road to routine implementation?
title_sort technology readiness level of biodiversity monitoring with molecular methods where are we on the road to routine implementation
url https://mbmg.pensoft.net/article/130834/download/pdf/
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