Synthetic Microbial Communities Enhance Pepper Growth and Root Morphology by Regulating Rhizosphere Microbial Communities

Synthetic microbial community (SynCom) application is efficient in promoting crop yield and soil health. However, few studies have been conducted to enhance pepper growth via modulating rhizosphere microbial communities by SynCom application. This study aimed to investigate how SynCom inoculation at...

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Main Authors: Tian You, Qiumei Liu, Meng Chen, Siyu Tang, Lijun Ou, Dejun Li
Format: Article
Language:English
Published: MDPI AG 2025-01-01
Series:Microorganisms
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Online Access:https://www.mdpi.com/2076-2607/13/1/148
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author Tian You
Qiumei Liu
Meng Chen
Siyu Tang
Lijun Ou
Dejun Li
author_facet Tian You
Qiumei Liu
Meng Chen
Siyu Tang
Lijun Ou
Dejun Li
author_sort Tian You
collection DOAJ
description Synthetic microbial community (SynCom) application is efficient in promoting crop yield and soil health. However, few studies have been conducted to enhance pepper growth via modulating rhizosphere microbial communities by SynCom application. This study aimed to investigate how SynCom inoculation at the seedling stage impacts pepper growth by modulating the rhizosphere microbiome using high-throughput sequencing technology. SynCom inoculation significantly increased shoot height, stem diameter, fresh weight, dry weight, chlorophyll content, leaf number, root vigor, root tips, total root length, and root-specific surface area of pepper by 20.9%, 36.33%, 68.84%, 64.34%, 29.65%, 27.78%, 117.42%, 35.4%, 21.52%, and 39.76%, respectively, relative to the control. The Chao index of the rhizosphere microbial community and Bray–Curtis dissimilarity of the fungal community significantly increased, while Bray–Curtis dissimilarity of the bacterial community significantly decreased by SynCom inoculation. The abundances of key taxa such as <i>Scedosporium</i>, <i>Sordariomycetes</i>, <i>Pseudarthrobacter</i>, <i>norankSBR1031</i>, and <i>norankA4b</i> significantly increased with SynCom inoculation, and positively correlated with indices of pepper growth. Our findings suggest that SynCom inoculation can effectively enhance pepper growth and regulate root morphology by regulating rhizosphere microbial communities and increasing key taxa abundance like <i>Sordariomycetes</i> and <i>Pseudarthrobacter</i>, thereby benefiting nutrient acquisition, resistance improvement, and pathogen resistance of crops to ensure sustainability.
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spelling doaj-art-22774bf88e8e45039cb1d4cee5d6c81b2025-01-24T13:42:49ZengMDPI AGMicroorganisms2076-26072025-01-0113114810.3390/microorganisms13010148Synthetic Microbial Communities Enhance Pepper Growth and Root Morphology by Regulating Rhizosphere Microbial CommunitiesTian You0Qiumei Liu1Meng Chen2Siyu Tang3Lijun Ou4Dejun Li5College of Horticulture, Hunan Agricultural University, Changsha 410125, ChinaHunan Provincial Key Laboratory of Agroecological Engineering, Key Laboratory of Agro-Ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha 410125, ChinaCollege of Horticulture, Hunan Agricultural University, Changsha 410125, ChinaHunan Provincial Key Laboratory of Agroecological Engineering, Key Laboratory of Agro-Ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha 410125, ChinaCollege of Horticulture, Hunan Agricultural University, Changsha 410125, ChinaHunan Provincial Key Laboratory of Agroecological Engineering, Key Laboratory of Agro-Ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha 410125, ChinaSynthetic microbial community (SynCom) application is efficient in promoting crop yield and soil health. However, few studies have been conducted to enhance pepper growth via modulating rhizosphere microbial communities by SynCom application. This study aimed to investigate how SynCom inoculation at the seedling stage impacts pepper growth by modulating the rhizosphere microbiome using high-throughput sequencing technology. SynCom inoculation significantly increased shoot height, stem diameter, fresh weight, dry weight, chlorophyll content, leaf number, root vigor, root tips, total root length, and root-specific surface area of pepper by 20.9%, 36.33%, 68.84%, 64.34%, 29.65%, 27.78%, 117.42%, 35.4%, 21.52%, and 39.76%, respectively, relative to the control. The Chao index of the rhizosphere microbial community and Bray–Curtis dissimilarity of the fungal community significantly increased, while Bray–Curtis dissimilarity of the bacterial community significantly decreased by SynCom inoculation. The abundances of key taxa such as <i>Scedosporium</i>, <i>Sordariomycetes</i>, <i>Pseudarthrobacter</i>, <i>norankSBR1031</i>, and <i>norankA4b</i> significantly increased with SynCom inoculation, and positively correlated with indices of pepper growth. Our findings suggest that SynCom inoculation can effectively enhance pepper growth and regulate root morphology by regulating rhizosphere microbial communities and increasing key taxa abundance like <i>Sordariomycetes</i> and <i>Pseudarthrobacter</i>, thereby benefiting nutrient acquisition, resistance improvement, and pathogen resistance of crops to ensure sustainability.https://www.mdpi.com/2076-2607/13/1/148synthetic microbial communitypepper growthmicrobial communitykey taxa
spellingShingle Tian You
Qiumei Liu
Meng Chen
Siyu Tang
Lijun Ou
Dejun Li
Synthetic Microbial Communities Enhance Pepper Growth and Root Morphology by Regulating Rhizosphere Microbial Communities
Microorganisms
synthetic microbial community
pepper growth
microbial community
key taxa
title Synthetic Microbial Communities Enhance Pepper Growth and Root Morphology by Regulating Rhizosphere Microbial Communities
title_full Synthetic Microbial Communities Enhance Pepper Growth and Root Morphology by Regulating Rhizosphere Microbial Communities
title_fullStr Synthetic Microbial Communities Enhance Pepper Growth and Root Morphology by Regulating Rhizosphere Microbial Communities
title_full_unstemmed Synthetic Microbial Communities Enhance Pepper Growth and Root Morphology by Regulating Rhizosphere Microbial Communities
title_short Synthetic Microbial Communities Enhance Pepper Growth and Root Morphology by Regulating Rhizosphere Microbial Communities
title_sort synthetic microbial communities enhance pepper growth and root morphology by regulating rhizosphere microbial communities
topic synthetic microbial community
pepper growth
microbial community
key taxa
url https://www.mdpi.com/2076-2607/13/1/148
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