Swiftly identifying strongly unique k-mers

Abstract Motivation Short DNA sequences of length k that appear in a single location (e.g., at a single genomic position, in a single species from a larger set of species, etc.) are called unique k-mers. They are useful for placing sequenced DNA fragments at the correct location without computing al...

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Bibliographic Details
Main Authors: Jens Zentgraf, Sven Rahmann
Format: Article
Language:English
Published: BMC 2025-07-01
Series:Algorithms for Molecular Biology
Subjects:
Online Access:https://doi.org/10.1186/s13015-025-00286-6
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