spCLUE: a contrastive learning approach to unified spatial transcriptomics analysis across single-slice and multi-slice data

Abstract Advances in spatial transcriptomics demand new tools to integrate data across tissue slices and identify consistent spatial domains. We introduce spCLUE, a comprehensive framework combining multi-view graph network, contrastive learning, attention mechanisms, and a batch prompting module to...

Full description

Saved in:
Bibliographic Details
Main Authors: Xiang Wang, Wei Vivian Li, Hongwei Li
Format: Article
Language:English
Published: BMC 2025-06-01
Series:Genome Biology
Online Access:https://doi.org/10.1186/s13059-025-03636-0
Tags: Add Tag
No Tags, Be the first to tag this record!