Aryana-bs: context-aware alignment of bisulfite-sequencing reads by Hassan Nikaein, Ali Sharifi-Zarchi, Afsoon Afzal, Saeedeh Ezzati, Farzane Rasti, Hamidreza Chitsaz, Govindarajan Kunde-Ramamoorthy

“…It outperforms existing methods, such as BSMAP, bwa-meth, Bismark, BSBolt, and abismal, particularly in robustness against genomic biases and alignment of longer, higher-error reads, demonstrating suitability for cancer research and cell-free DNA studies. While the Expectation-Maximization (EM) algorithm provides only modest initial improvements, it establishes a valuable framework for future refinement and potential enhancements in sensitive applications.…”
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A Framework for Autonomous UAV Navigation Based on Monocular Depth Estimation by Jonas Gaigalas, Linas Perkauskas, Henrikas Gricius, Tomas Kanapickas, Andrius Kriščiūnas

“…The solution utilizes a depth image estimation model to create an occupancy grid map of the surrounding area and uses an A* path planning algorithm to find optimal paths to end goals while navigating around the obstacles. …”
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Research on noninvasive electrophysiologic imaging based on cardiac electrophysiology simulation and deep learning methods for the inverse problem by Yi Chang, Ming Dong, Lihong Fan, Bochao Kang, Weikai Sun, Xiaofeng Li, Zhang Yang, Ming Ren

“…Abstract Background The risk stratification and prognosis of cardiac arrhythmia depend on the individual condition of patients, while invasive diagnostic methods may be risky to patient health, and current non-invasive diagnostic methods are applicable to few disease types without sensitivity and specificity. …”
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Different strokes: differences in the characteristics and outcomes of BCVI and non-BCVI strokes in trauma patients by Lillian S Kao, Charles E Wade, Xu Zhang, Bryan A Cotton, Sean I Savitz, Michelle K McNutt, Cedar Slovacek, David Rosenbaum, Hari Kishan Reddy Indupuru, John Harvin

“…Blunt cerebrovascular injury (BCVI)–related strokes and mortality have decreased, likely due to refined screening and treatment algorithms in trauma literature; however, there is a paucity of research addressing non-BCVI strokes in trauma. …”
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Estimation of gas hydrate and free gas saturation using the rock physics model based on constrained least squares and trust region method in the Shenhu Area, South China Sea by Dajiang Meng, Dajiang Meng, Ruwei Zhang, Ruwei Zhang, Yuan Gu, Yuan Gu, Baojin Zhang, Baojin Zhang, Yunqian Lu, Yunqian Lu, Jiangnan Lin, Jiangnan Lin, Lijie Wang, Lijie Wang

“…We formulated the inversion as a multi-parameter constrained least squares problem and then used the trust region algorithm to find the optimal least-squares solution. …”
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Joint Lagrangian Relaxation and Dynamic Programming Approach for a Multi-Period Multi-Product Location-Inventory Problem by Claudio Araya-Sassi, German Paredes-Belmar, Gabriel Gutierrez-Jarpa, Ricardo Gatica Escobar

“…We propose a Lagrangian relaxation algorithm and the subgradient approach as a solution method. …”
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Enhanced Inverse Model Predictive Control for EV Chargers: Solution for DC–DC Side by Abdullah Berkay Bayindir, Ali Sharida, Sertac Bayhan, Haitham Abu-Rub

“…To address this challenge, the proposed method employs an adaptive estimation strategy utilizing a recursive least square algorithm for online dynamic model estimation. This real-time estimated model enables IMPC to predict optimal switching states with improved reliability. …”
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Application of Quantum Key Distribution to Enhance Data Security in Agrotechnical Monitoring Systems Using UAVs by Makhabbat Bakyt, Luigi La Spada, Nida Zeeshan, Khuralay Moldamurat, Sabyrzhan Atanov

“…QKD is not an encryption algorithm but a secure key distribution protocol that provides information-theoretic security by leveraging the principles of quantum mechanics. …”
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Maglev Derived Systems: An Interoperable Freight Vehicle Application Focused on Minimal Modifications to the Rail Infrastructure and Vehicles by Jesus Felez, Miguel A. Vaquero-Serrano, William Z. Liu, Carlos Casanueva, Michael Schultz-Wildelau, Gerard Coquery, Pietro Proietti

“…Target speed profiles were precomputed using dynamic programming, while a model predictive control algorithm determined the optimal train state and control trajectories. …”
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Exploring Stand Parameters Using Terrestrial Laser Scanning in <i>Pinus tabuliformis</i> Plantation Forests by Miaomiao He, Yawei Hu, Jiongchang Zhao, Yang Li, Bo Wang, Jianjun Zhang, Hideyuki Noguchi

“…A comparative shortest path (CSP) algorithm was used for individual tree segmentation to investigate the effect of parameter selection on measurement accuracy. …”
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A robust method to simultaneously place sensors and calibrate parameters for urban drainage pipe system models using Bayesian decision theory by Yuan Huang, Junyi Xiong, Jiangjiang Zhang, Feifei Zheng, Yiran Ji, Hoshin Gupta

“…The UDM is sequentially calibrated using an ensemble smoother algorithm with observation data collected from these strategically placed sensors. …”
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A Multi-Sensor Fusion Approach Combined with RandLA-Net for Large-Scale Point Cloud Segmentation in Power Grid Scenario by Tianyi Li, Shuanglin Li, Zihan Xu, Nizar Faisal Alkayem, Qiao Bao, Qiang Wang

“…A data acquisition scheme that integrates LiDAR and a binocular depth camera, implementing the FAST-LIO algorithm, is proposed to achieve the spatiotemporal synchronization and fusion of sensor data. …”
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An Artificial Intelligence-Based Approach With Photoplethysmogram and Heart Rate Variability for Sleep Bruxism Diagnosis by Omer Eris, Mehmet Recep Bozkurt, Seval Bulut Eris, Cahit Bilgin

“…Using four artificial intelligence (AI) algorithms, we built classification models that distinguished bruxism labels from control labels. …”
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Adaptive Virtual Inertia and Voltage Estimation: Enabled Model Predictive Control for Improved Performance in Islanded DC Microgrids by Salisu Abdullahi, Khaled Eltag, Lei Weining, Chen Xiaohu

“…The virtual DC grid voltage is estimated using covariance adaptation in a standard Kalman filter algorithm. State estimation via feedback control stabilizes the voltage. …”
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Integrating FPGA-Based Acceleration in Industrial Motion Control System by Claudio Rubattu, Antonio Ledda, Francesco Ratto, Chaitanya Jugade, Dip Goswami, Francesca Palumbo

“…To achieve this, these devices are exploring the use of computer vision algorithms for automatic recognition of wafer positioning and die size. …”
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SimulatorOrchestrator: A 6G-Ready Simulator for the Cell-Free/Osmotic Infrastructure by Rohin Gillgallon, Reham Almutairi, Giacomo Bergami, Graham Morgan

“…The simulated 6G architecture, combined with the optimal routing algorithm and MEL (<span style="font-variant: small-caps;">Microelements</span> software components) allocation policy, was able to reduce the time required to route all communications from IoT devices to the cloud by up to 50.4% compared to analogous routing algorithms used within 5G architectures.…”
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Dual-Closed-Loop Control System for Polysilicon Reduction Furnace Power Supply Based on Hysteresis PID and Predictive Control by Shihao Li, Tiejun Zeng, Shan Jian, Guiping Cui, Ziwen Che, Genghong Lin, Zeyu Yan

“…Meanwhile, the outer loop employs a hybrid MFAC-based improved PID algorithm to optimize the temperature tracking performance, achieving precise temperature control even in the presence of system uncertainties. …”
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DrugBERT: a BERT-based approach integrating LDA topic embedding and efficacy-aware mechanism for predicting anti-tumor drug efficacy by Weiwei Zhu, Xiaodong Jiang, Lei Zhang, Peng Zhou, Xinping Xie, Hongqiang Wang

“…In addition, the SMOTE algorithm is used to synthesize samples of the minority class to solve the problem of data imbalance. …”
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Multivariate Machine Learning Model Based on YOLOv8 for Traffic Flow Prediction in Intelligent Transportation Systems by Fukui Wu, Hanzhong Tan, Linfeng Zhang, Shuangbing Wen, Tao Hu

“…Building on this, we propose a hybrid model combining Gradient Boosting Regression (GBR) and Support Vector Regression (SVR), where the GBR component captures complex nonlinear patterns in traffic flow data, while the SVR component enhances the model&#x2019;s generalization ability by optimizing predictions. …”
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A Lightweight Method for Road Defect Detection in UAV Remote Sensing Images with Complex Backgrounds and Cross-Scale Fusion by Wenya Zhang, Xiang Li, Lina Wang, Danfei Zhang, Pengfei Lu, Lei Wang, Chuanxiang Cheng

“…Experimental findings indicate that the CSGEH-YOLO algorithm surpasses the baseline YOLOv8s, achieving a 3.1% improvement in mAP. …”
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