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Reference architectures for ambient assisted living: a scoping review protocol
Published 2020-10-01Get full text
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CellMet: Extracting 3D shape and topology metrics from confluent cells within tissues.
Published 2025-07-01Get full text
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NUFEB: A massively parallel simulator for individual-based modelling of microbial communities.
Published 2019-12-01Get full text
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Tissue Forge: Interactive biological and biophysics simulation environment.
Published 2023-10-01“…Tissue Forge is an open-source interactive environment for particle-based physics, chemistry and biology modeling and simulation. …”
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Bringing bioinformatics to schools with the 4273pi project.
Published 2022-01-01“…At secondary school level, computing is often taught in isolation from other sciences, and its importance in biological research is not fully realised, leaving pupils unprepared for the computational component of Higher Education and, subsequently, research in the life sciences. …”
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Gag-Pol processing during HIV-1 virion maturation: a systems biology approach.
Published 2013-01-01Get full text
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Partitioning variability in animal behavioral videos using semi-supervised variational autoencoders.
Published 2021-09-01“…Detailed behavioral measurements are now often collected using video cameras, resulting in an increased need for computer vision algorithms that extract useful information from video data. …”
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The spatial structure of stimuli shapes the timescale of correlations in population spiking activity.
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The Role of Adherence and Retreatment in De Novo Emergence of MDR-TB.
Published 2016-03-01Get full text
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Mslar: Microbial synthetic lethal and rescue database.
Published 2023-06-01“…This concept can also be extended to three or more genes for SL. Computational and experimental methods have been developed to predict and verify SL gene pairs, especially for yeast and Escherichia coli. …”
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Removing direct photocurrent artifacts in optogenetic connectivity mapping data via constrained matrix factorization.
Published 2024-05-01“…PhoRC runs faster than real time and is available as open source software.…”
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Urban land use function prediction method based on RF and cellular automaton model
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BanglaLem: A Transformer-based Bangla Lemmatizer with an Enhanced Dataset
Published 2025-12-01Get full text
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Predicting Affinity Through Homology (PATH): Interpretable binding affinity prediction with persistent homology.
Published 2025-06-01“…PATH+ also offers an improvement of 𝒪 (m + n)3 in computational complexity and is empirically over 10 times faster than the dominant (uninterpretable) computational topology algorithm for BAP. …”
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Identifying patterns differing between high-dimensional datasets with generalized contrastive PCA.
Published 2025-02-01Get full text
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