Comparison of metagenomic analysis of fecal and gastrointestinal tract samples for identifying beneficial gut microorganisms by Ji-Seon Ahn, Eui-Jeong Han, Hea-Jong Chung, Hea-Jong Chung, Hea-Jong Chung

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Metagenomic sequencing reveals the taxonomic and functional characteristics of rumen microorganisms in Dongliu buffalo by Wenwen Lu, Jinling Hua, Min Zhang, Longfei Yan, Huwei Zhao, Xiaokang Lv

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Microbial diversity and function in bamboo ecosystems by Yexuan Wang, Huimin Ren, Huimin Ren, Yue Zhong, Ruisheng Song, Ruisheng Song, Siyuan Jiang, Mengjing Lai, Yuqi Shen, Shenkui Liu, Shenkui Liu, Wenhui Shi, Wenhui Shi, Guoning Qi, Guoning Qi

“…The microbial community composition and diversity in various bamboo soils have been successfully characterized, with some bamboo-associated microorganisms identified and shown to promote plant growth, demonstrating considerable application potential. …”
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The Impact of Flooding on Soil Microbial Communities and Their Functions: A Review by Ashim Kumar Das, Da-Sol Lee, Youn-Ji Woo, Sharmin Sultana, Apple Mahmud, Byung-Wook Yun

“…Over the years, beneficial microorganisms such as plant-growth-promoting microbes (PGPMs) have been identified as important in regulating soil nutrients and microbial communities in wetland environments, thereby enhancing soil health and promoting better plant growth and development. …”
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Mature Tiankengs are biodiversity hotspots of soil microorganisms in the karst region by Junbo Yang, Xiaohui Wang, Keyi Wang, Danjuan Zeng, Ling Mo, Shuai Li, Baozhu Fang, Bhagwan Rekadwad, Wenjun Li, Gaozhong Pu

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Diversity and functional roles of endophytic and rhizospheric microorganisms in Ophioglossum vulgatum L.: implications for bioactive compound synthesis by Xian-Nv Long, Xian-Nv Long, Xian-Nv Long, Xing-Kai Zhang, Yue Wu, Shu-Shuang Tang, Tai-Xiong Zheng, Di Chen, Guan-Hua Cao, Guan-Hua Cao, Guan-Hua Cao, Xu-Hong Zhou, Sen He, Sen He, Sen He

“…Network analysis highlighted Basidiomycota as keystone taxa, with modular community structure. Functional predictions revealed that endophytic and rhizospheric microorganisms were associated with critical metabolic pathways, particularly in the biosynthesis of flavonoids and alkaloids (primary bioactive compounds). …”
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Taxonomic and functional diversity of alkali-tolerant bacteria enriched from the Taklimakan Desert by Feng Wen, Guo Yang, Xueling Zhao, Tiantian Zhao, Linquan Bai, Zhanfeng Xia

“…Approximately 14.07 and 61.48% of the isolates were categorized as alkali-tolerant and alkalophilic, respectively, with 85 strains capable of growing under extreme conditions (pH 12 and/or 25% salinity). Functional screening revealed enzymatic activity in a substantial portion of the isolates: 20.35% produced amylase, 19.91% protease, 30.30% cellulase, and 47.61% exhibited at least one enzymatic function. …”
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Endophytic Diversity in Sicilian Olive Trees: Identifying Optimal Conditions for a Functional Microbial Collection by Dalila Crucitti, Stefano Barone, Salvadora Navarro-Torre, Paola Quatrini, Francesco Carimi, Tiziano Caruso, Davide Pacifico

“…This study aims to identify the optimal conditions—host, plant material, seasonality, and agricultural practices—for isolating and developing a collection of culturable endophytic microorganisms to support sustainable <i>Olea europaea</i> L. cultivation. …”
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Screening and Functional Prediction of Rumen Microbiota Associated with Methane Emissions in Dairy Cows by Jiatai Bao, Lei Wang, Shanshan Li, Jiahe Guo, Pan Ma, Xixia Huang, Gang Guo, Hailiang Zhang, Yachun Wang

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Analysis of structural and metabolic changes in surface microorganisms following powdery mildew infection in wheat and assessment of their potential function in biological control. by Zhen Wu, Xiaodong Xue

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Fungicides affect the structure and function of soil microorganisms and the physiology of four riparian tree species – evidence from a pot experiment by Jacob Schnurr, Alexander Feckler, Sabine Filker, Jochen P. Zubrod, Johanna Mayer, Klaus Schützenmeister, Hermann F. Jungkunst, Mirco Bundschuh

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Plant growth-promoting rhizobacteria on peanut seedlings (Arachis hypogaea L.): Isolation, taxonomical, and functional characterization by Ezequiel Darío Bigatton, Ibrahim Ayoub, María Ángeles Castillejo, Carolina Merlo, Carolina Vázquez, Mariela Valeria Archilla, Marina Bruno, María Paula Martín, Romina Paola Pizzolitto, Lucas Esteban Dubini, Enrique Iván Lucini, Ricardo Javier Haro

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Ecosystem carbon storage and carbon metabolizing microorganisms in three types of grasslands on the Qinghai-Tibet Plateau by Qian Liu, Wenquan Yang, Jiancun Kou, Qinyao Li, Yangcan Zhang, Xilai Li, Jing Zhang, Zhiting Hao, Lu Chi, Yuze Ning

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Identifying microbial functional guilds performing cryptic organotrophic and lithotrophic redox cycles in anaerobic granular biofilms. by Zachary Flinkstrom, Samuel J Bryson, Bojan Pelivano, Pieter Candry, Kristopher A Hunt, Mari-Karoliina H Winkler

“…Comparisons between the functional gene content of forty metagenome assembled genomes (MAGs) identified phylogenetically cohesive functional guilds. …”
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Research on the quality deterioration of UHT milk products during shelf life: core microorganisms and related characteristics by Ruixue Ding, Kairu He, Rina Wu, Mengxue Lou, Zhili Liu, Yuqiong Piao, Xiaoyan Liu, Zhishen Mu, Junrui Wu

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Stratified dietary inflammatory potential identifies oral and gut microbiota differences associated with cognitive function in older adults by Jinxiu Liu, Yuping Zhang, Xiuli Li, Zhaoyi Hou, Bixia Wang, Lili Chen, Mingfeng Chen

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Key Microorganisms Influencing Mineral-Protected Organic Carbon Formation in Soils with Exogenous Carbon Addition by Limin Zhang, Yuanhong Luo, Yang Wang, Chengfu Zhang, Guojun Cai, Weici Su, Lifei Yu

“…To address this, we conducted exogenous C addition culture experiments to investigate changes in MPOC and soil microorganisms and identify the primary microorganisms influencing MPOC formation. …”
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Metagenomic insights into microbial community succession and its functional changes during the stage of acetic acid fermentation of shanxi aged vinegar by Lingling Yang, Yufeng Yan, Jin Shen, Yaoyao Xia, Fanfan Lang, Cong Chen, Wei Zou

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Root Endophytic Microorganisms Contribute to the Attribute of Full-Year Shooting in Woody Bamboo <i>Cephalostachyum pingbianense</i> by Lushuang Li, Bin Li, Qing Li, Lianchun Wang, Hanqi Yang

“…To identify the seasonal variations in the root endophytic bacterial and fungal communities of <i>C. pingbianense,</i> and to assess their correlation with bamboo shoot productivity, the roots of <i>C. pingbianense</i> were selected as research materials, and the 16S rRNA and ITS rDNA genes of root endophytic microorganisms were sequenced using the Illumina platform. …”
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Genomic Functional Analysis of Novel Radiation-Resistant Species of <i>Knollia</i> sp. nov. S7-12^T from the North Slope of Mount Everest by Xinyue Wang, Yang Liu, Zhiyuan Chen, Kexin Wang, Guangxiu Liu, Tuo Chen, Binglin Zhang

“…In this study, a novel species (herein, S7-12^T) was isolated from the moraine of Mount Everest, and its morphology and functional and genomic characteristics were analyzed. …”
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