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Quantifying the effects of the mitochondrial genome on milk production traits in dairy cows: Empirical results and modeling challenges
Published 2025-01-01“…Thus, the proportion of total variance explained by mitogenome inheritance was estimated using 5 different models: (1) a cytoplasmic model with maternal lineages (CYTO), (2) a haplotypic model with mitogenome sequences (HAPLO), (3) an amino acid model with unique amino acid sequences (AMINO), (4) an evolutionary model based on a phylogenetic analysis using Bayesian Evolutionary Analysis Sampling Trees phylogenetic analysis (EVOL), and (5) a mitogenome SNP model (SNPmt). …”
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Planar cell polarity coordination in a cnidarian embryo provides clues to animal body axis evolution
Published 2025-07-01“…Body axis specification is a crucial event in animal embryogenesis and was an essential evolutionary innovation for founding the animal kingdom. …”
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A comprehensive analysis of the epidemiological and genomic characteristics of global Serratia Marcescens
Published 2025-01-01“…Antibiotic resistance genes (ARGs) were identified via Blastn, sequence types (STs) were determined with a proprietary tool, and phylogenetic analysis was conducted to explore evolutionary relationships. Results: The study analysed genomes from 33 countries, with major contributions from the USA (27.8%), UK (15.3%), Italy (14.7%), and Japan (10.7%). …”
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A second horizon scan of biogeography: Golden Ages, Midas touches, and the Red Queen
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Do leaf traits shape herbivory in tropical montane rainforests? A multispecies approach
Published 2024-10-01“…Abstract The co‐evolutionary arms race between herbivores and plants forces plants to evolve protection strategies that reduce the palatability of the plant modules attacked by the herbivores. …”
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Stress Management: How the Endoplasmic Reticulum Mitigates Protein Misfolding and Oxidative Stress by the Dual Role of Glutathione Peroxidase 8
Published 2025-06-01“…This review summarizes the current knowledge of three major branches of the unfolded protein response: the IRE1, PERK, and ATF6 signaling pathways. …”
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The Effect of Poppy Oil on Egg Production and Calcium Metabolism in Japanese Quail
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Searching for New Objects with the B[e] Phenomenon
Published 2025-06-01“…Objects with the B[e] phenomenon, whose defining features are the presence of forbidden emission lines and infrared excess coming from circumstellar dust, represent a broad range of evolutionary stages from pre-main-sequence to planetary nebulae. …”
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Evolution, Structural and Functional Characteristics of the <i>MADS-box</i> Gene Family and Gene Expression Through Methyl Jasmonate Regulation in <i>Panax ginseng</i> C.A. Meyer
Published 2024-12-01“…Despite their distinct evolutionary clusters, a significant number of members contains common conserved motifs. …”
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Interpretation of Historic Urban Landscape Genes: A Case Study of Harbin, China
Published 2024-11-01“…The results indicate that: (1) The historic urban landscape genes are comprised of explicit landscape pattern genes; street and alley texture genes; architectural appearance genes; and implicit human settlement culture genes, industrial culture genes, historical culture genes, and spiritual culture genes. (2) The evolutionary traits of Harbin’s historic urban landscape genes manifest in several ways: the evolution of its landscape pattern genes, featuring “three-tiered terraces, balanced spatial arrangement, surrounded by mountains and rivers, and fan-shaped radial layout”; the evolution of its street and alley texture genes, exhibited through “a blend of Chinese and Western styles, sprawling and interconnected, unit linkage, and multi-dimensional intersections”; the evolution of its architectural style genes, marked by “diverse styles, a harmonious fusion of Chinese and Western elements, grouped interdependence, and adaptation to the times”; the evolution of its human settlement culture genes, highlighted by “a secluded lifestyle, diverse customs, and the coexistence of Chinese and Western cultures”; the evolution of its historical culture genes, distinguished by “unity in diversity and multicultural differentiation”; and the evolution of its spiritual culture genes, characterized by “pluralistic beliefs and inclusiveness”. (3) The essential difference between historic urban landscape genes and other genes lies in their adaptive evolution in response to environmental changes over generations and their ability to reveal the influence mechanisms among genes, between genes and landscape features, and between genes and the environment. …”
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Factors influencing the accuracy and precision in dating single gene trees
Published 2025-05-01“…Knowing the time of appearance of a taxon sets the evolutionary context by connecting it with past ecosystems and species. …”
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