The role of endothelial cell-related gene COL1A1 in prostate cancer diagnosis and immunotherapy: insights from machine learning and single-cell analysis by Gujun Cong, Jingjing Shao, Feng Xiao, Haixia Zhu, Peipei Kang

“…Method By integrating clinical and transcriptomic data from TCGA-PRAD, we initially identified key endothelial cell-related genes in PRAD samples through single-cell analysis. …”
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Interleukin-6 as a Pan-Cancer Prognostic Inflammatory Biomarker: A Population-Based Study and Comprehensive Bioinformatics Analysis by Xie H, Wei L, Ruan G, Zhang H, Shi H

“…The differential expression of IL-6 and its association with survival and immune cell infiltration were investigated using the TCGA database. The SangerBox database was used to analyze the correlation between IL-6 expression and immune checkpoint (ICP), tumor mutation burden (TMB), and microsatellite instability (MSI) in cancer. …”
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Prognostic models of immune-related cell death and stress unveil mechanisms driving macrophage phenotypic evolution in colorectal cancer by Hao Liu, Chuhan Zhang, Sanfei Peng, Yuhan Yin, Yishi Xu, Sihan Wu, Liping Wang, Yang Fu

“…Furthermore, we performed enrichment analyses and deconvolution algorithms to elucidate the complex interactions between immune cell infiltration and the processes of PCD and stress within a substantial array of transcriptomic data from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus data base (GEO) related to CRC. …”
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基于生物信息学途径评估 UBE2 家族及 UBE2T 基因在肺腺癌中的表达及临床意义 by 杨豪帅, 赖慧娜, 饶怡茹, 林晓平

“…【方法】利用linkedomics平台进行UBE2C、UBE2M、UBE2S、UBE2T、UBE2V2 mRNA表达水平与肺腺癌临床特征之间的关系分析，对总生存时间（OS）（Cox回归检验）、总分期（Kruskal-WallisH检验）、T分期（Kruskal-WallisH检验）、N分期（Kruskal-WallisH检验）及M分期（Wilcox秩和检验）进行差异比较。运用肿瘤基因组图谱（TCGA）数据库获取UBE2T基因在肺腺癌组织和癌旁组织中的表达信息，将结果进行两独立样本t检验。…”
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Microbial abundance and diversity in water, and immune parameters of red tilapia reared in bioflocs system with different fish density (25 fish/m3, 50 fish/m3, and 100 fish/m3) by Frid Agustinus, . Widanarni, Julie Ekasari

“…Parameter imunitas meliputi gambaran darah diukur dengan pengambilan contoh darah yang dilakukan pada tiga ekor ikan pada hari ke 0, 50, dan 99. Kelimpahan bakteri pada semua perlakuan pada setiap titik pengamatan tidak menunjukkan perbedaan yang nyata. …”
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The recirculated aquaculture system (RAS) development with nanobubble application to improve growth performance of grouper fish fry culture by Iik Muslihul Hanif, Irzal Effendi, Tatag Budiardi, Iis Diatin

“…Padat tebar yang digunakan adalah 500, 600, dan 700 ekor/m3, sedangkan sistem budidaya terdiri dari RAS tanpa NBs, RAS dengan NBs dan kontrol (sistem pergantian air 200%), setiap perlakuan terdiri dari atas tiga ulangan. Hasil penelitian menunjukkan bahwa pendederan menggunakan RAS dengan NBs dengan padat tebar 600 ekor/m2 menunjukkan kinerja produksi ikan kerapu yang terbaik.   …”
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MOJI PREDŠASNICI BISKUPI - U SENJU, OTOČCU, KRBAVI, MODRUŠU, VINODOLU I RIJECI by MILE BOGOVIĆ

“…Za takav pristup dovoljno podataka imamo tek od početka 17. stoljeća, dok prije toga imamo više slučajeva da nismo sigurni ni u postojanje biskupa navedenog imena. …”
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Uticaj tržišnih cena električne energije na isplativost buduće reverzibilne hidroelektrane u Srbiji by Radoš Čabarkapa, Vladimir M. Šiljkut, Danilo Komatina, Miroslav Tomašević

“…Deregulacija u elektroenergetici, liberalizacija tržišta električne energije, tendencija ka povezivanju tržišta širom Evrope, uvođenje podsticaja za izgradnju i korišćenje obnovljivih izvora energije (OIE) i – posledično – sve veće njihovo prisustvo u elektroenergetskim sistemima, poprimili su presudan uticaj na veleprodajne cene električne energije. Pored toga, uvođenje taksi na CO2 dodatno je povećalo ukupne cene električne energije, ali je – sa druge strane – smanjilo profit termoelektrana (TE) na fosilna goriva. …”
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Cellular heterogeneity and communication networks in gastric cancer: Single-cell analysis reveals β-hydroxybutyrylation-associated genes and immune infiltration characteristics by You Hu, Jun Xu, Jian Lv, Yan Qin, Yongda Lu, Fan Cen, Hongbao Yang, Kai Chen, Suhua Xia

“…We further constructed a robust risk scoring model incorporating these genes, achieving AUC values of 0.72, 0.69, and 0.66 for predicting 1-, 3-, and 5-year survival in the TCGA dataset. These findings underscore the prognostic value of Kbhb-associated genes and their potential as therapeutic targets. …”
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A New Prognostic Risk Model Based on PPAR Pathway-Related Genes in Kidney Renal Clear Cell Carcinoma by Yingkun Xu, Xiunan Li, Yuqing Han, Zilong Wang, Chenglin Han, Ningke Ruan, Jianyi Li, Xiao Yu, Qinghua Xia, Guangzhen Wu

“…For this study, we first found the PPAR pathway-related genes on the gene set enrichment analysis (GSEA) website and found the KIRC mRNA expression data and clinical data through TCGA database. Subsequently, we used R language and multiple R language expansion packages to analyze the expression, hazard ratio analysis, and coexpression analysis of PPAR pathway-related genes in KIRC. …”
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Hubungan Jumlah Komplikasi Kronik Dengan Derajat Gejala Depresi Pada Pasien Diabetes Melitus Tipe 2 Di Poliklinik Rsup Dr. M. Djamil Padang by Try Rahmi Lussii Karsuita, Eva Decroli, Delmi Sulastri

“…Gejala depresi pada responden dengan satu komplikasi sebesar 6,9%, dengan dua komplikasi 42,4%, dengan tiga komplikasi 88,8 % dan empat komplikasi sebesar 60%. …”
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Potential role of P4HB in the tumor microenvironment and its clinical prognostic value: a comprehensive pan-cancer analysis and experimental validation with a focus on KIRC by Linxue Zhang, Yu-wei Li, Tianyi Xie, Ke Sun, Xiang Huang, Wei Xiong, Rui-ji Liu

“…Methods We analyzed the expression and survival of P4HB in pan-cancer through the TCGA database, and verified the protein level of P4HB by the HPA database. …”
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Identification and validation of prognostic biomarkers in ccRCC: immune-stromal score and survival prediction by Fang Lyu, Yuxin Zhong, Qingliu He, Wen Xiao, Xiaoping Zhang

“…Methods Data from the Cancer Genome Atlas (TCGA) and International Cancer Genome Consortium (ICGC) were subjected to analysis to compute immune and stromal scores utilizing the ESTIMATE algorithm. …”
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Multidimension Analysis of the Prognostic Value, Immune Regulatory Function, and ceRNA Network of LY6E in Individuals with Colorectal Cancer by Ting Li, Weidong Liu, Chun Wang, Man Wang, Wenjia Hui, Jiajie Lu, Feng Gao

“…The Kaplan–Meier analysis and Cox regression analysis showed that LY6E could be considered a favorable prognostic factor in TCGA and GEO cohort. The results of GSEA showed that high LY6E expression levels were associated with immune-related pathways, such as those involved in antigen processing and presentation and the intestinal immune network for IgA production. …”
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Segmentasi Pertumbuhan Padi berbasis Aerial Image menggunakan Fitur Warna dan Tekstur untuk Estimasi Produksi Hasil Panen by Muhammad Jainal Arifin, Achmad Basuki, Bima Sena Bayu Dewantara

“…Ini dapat disebabkan oleh faktor alam, jenis varietas padi, dan model perawatan yang digunakan. Ini juga akan mempengaruhi hasil panen. Luasnya lahan membuat petani sulit untuk memantau bagian yang tidak terjangkau. …”
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Identification and validation of glucose metabolism-related gene signature in endometrial cancer by Juan Jiang, Nan Xia, Mei Yang, Ping Qiu, Wei Zhu, Jing Chen, Jiamei Zhu

“…Methods Differential analysis was conducted to identify differentially expressed genes (DEGs) between EC and normal samples from the TCGA-EC dataset. Glucose metabolism-related DEGs (GMR-DEGs) were then derived by intersecting these DEGs with GMRGs. …”
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Cultured sand sea cucumber growth with different water exchange systems by Debora Liubana, Joi Alfreddi Surbakt, Claudya Zyta Tobu

“…Parameter kualitas air juga menunjukkan kualitas yang optimal pada budidaya teripang secara terintegrasi. …”
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Model Klasifikasi Dengan Logistic Regression Dan Recursive Feature Elimination Pada Data Tidak Seimbang by Sutarman, Rimbun Siringoringo, Dedy Arisandi, Edi Kurniawan, Erna Budhiarti Nababan

“…Fitur dataset yang besar mengakibatkan beban komputasi,  dan  menurunkan kinerja klasifikasi. Terdapat tiga dataset yang digunakan pada penelitian ini yaitu Bank marketing, Glass, dan Musk II. …”
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Inhibitory Mechanism of Robiotic Bacteria on The Growth of Vibrio harveyi in Tiger Shrimp (Penaeus monodon) Larvae by . Widanarni, E. Ayuzar, . Sukenda

“…Jumlah sel V. harveyi pada perlakuan tanpa penambahan probiotik juga lebih tinggi, dibanding pada perlakuan dengan penambahan probiotik baik pada larva mati, larva hidup maupun air media pemeliharaan. …”
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Development of a prognostic gene signature and exploration of P4HA1 in the modulation of cuproptosis in colorectal cancer by RenJie Jiang, LinLin Ruan, Taohui Ding, Hongtao Wan, Yanglin Chen, XiaoJian Zhu, Zhijiang Huang, Dengke Yao, Ming Li, Bo Yi, Dan Liu

“…In this study, transcriptomic and clinical data from CRC patients available in the TCGA database were analyzed to investigate the impact of cuproptosis. …”
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