Advances in the omics research of Rosaceae by Wenjuan Lv, Dapeng Miao, Runtian Miao, Dongqing Fan, Juan Meng, Xu Liu, Tangren Cheng, Qixiang Zhang, Lidan Sun

“…Here, an overview of the applications of omics technologies in Rosaceae is provided. It includes whole-genome sequencing and assembly of various Rosaceae plants, as well as the utilization of genome-wide association studies, transcriptome, proteomics, metabolomics, and comparative genomics. …”
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In Vitro Pollen Viability, Fluorescence Microscopy, and Transcriptomic Comparison of Self-Pollinated and Cross-Pollinated Inflorescence of <i>Artemisia annua</i> L. to Analyze Cand... by Yimei Zang, Shengrong Cui, Shugen Wei, Limei Pan, Lingyun Wan, Xiaojun Ma, Zuliang Luo, Jine Fu, Chongnan Wang

“…The putative DEGs between the two groups provided important information for a further study of the molecular mechanisms of SI in <i>A. annua</i>. …”
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Differential gene expression in uterine endometrioid cancer cells and adjusted normal tissue by Dominik Kodada, Dominik Hadžega, Patrik Krumpolec, Nikola Janoštiaková, Gabriela Bľandová, Pavol Janega, Zuzana Ballová, Erik Dosedla, Gabriel Minárik, Vanda Repiská

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Screening and identification of a bacterial strain for the production of tetramethylpyrazine through solid-state fermentation and determination of its high-yield mechanism by Wanwan Zhuansun, Jun Xu, Zhiqiang Li, Hengzhao Liu, Yin Zhao, Lulu Chen, Shufang Shan, Xin Zeng, Binyue Xin, Huawei Zeng, Qinxiang Xu

“…Key genes involved in TTMP biosynthesis, such as gmuE and argJ, were identified. This study provides a potential strain and approach for enhancing TTMP yield while also deepening the theoretical understanding of the underpinning mechanisms.…”
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The Molecular Mechanisms Underlying Zucchini-Induced Changes in the Host Adaptation of Cotton- and Cucumber-Type <i>Aphis gossypii</i> by Yibin Pan, Weili Xu, Li Wang, Kaixin Zhang, Jichao Ji, Dongyang Li, Xiangzhen Zhu, Xueke Gao, Junyu Luo, Jinjie Cui

“…The findings provide new insights into the molecular mechanisms regulating <i>A. gossypii</i> phenotypic plasticity and contribute to the development of resistance management strategies.…”
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Early Transcriptional Changes in Feline Herpesvirus-1-Infected Crandell-Rees Feline Kidney Cells by Xiuqing Xiao, Fuqiang Xu, Fan Jia

“…For the first time, we conducted a systematic analysis of transcriptomic changes in CRFK cells following FHV-1 infection using RNA-seq. …”
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Understanding of the characteristics of fibroblasts in ischemic cardiomyopathy using single-nucleus RNA sequencing by Qianyuan Zhang, Ziwen Cai, Yongqiao Zhang

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A high-quality chromosome-level genome assembly of Antiaris toxicaria by Weicheng Huang, Jiaxin Xiang, Yamei Ding, Wanzhen Liu, Ni Fang, Yongmei Xiong, Seping Dai, Hui Yu

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Molecular Mechanism of the <i>Grid</i> Gene Family Regulating Growth Size Heteromorphism in <i>Cynoglossus semilaevis</i> by Yaning Wang, Yadong Chen, Yang Liu, Songlin Chen

“…We selected 500 female <i>Cynoglossus semilaevis</i> of different sizes for GWAS and transcriptome analysis to screen for differential genes. qPCR was performed to detect the expression of the genes in various tissues, and RNAi experiments were performed in testicular cells to knock down the <i>grid1</i> and <i>grid2</i> genes and transcriptome sequencing was performed to check the changes of the downstream genes. …”
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Foliar Spray of Cerium Oxide Nanoparticles (CeO₂ NPs) Improves Lead (Pb) Resistance in Rice by Hang Zhou, Junjie Liu, Ziyang Chen, Jing An, Jingxin Huo, Qing Bu, Tao Su, Liming Zhao, Xuefeng Shen, Yingbin Xue, Gangshun Rao, Naijie Feng, Dianfeng Zheng, Rui Zhang

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Metabolomic Profiling of <i>BPH14/BPH15</i> Pyramiding Rice and Its Implications for Brown Planthopper Resistance by Liang Hu, Dabing Yang, Hongbo Wang, Xueshu Du, Yan Wu, Liang Lv, Tongmin Mou, Aiqing You, Jinbo Li

“…Pyramiding the BPH resistance genes <i>BPH14</i> and <i>BPH15</i> provides rice crops with reliable and lasting protection against BPH. …”
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Oral and intratumoral microbiota influence tumor immunity and patient survival by Kaitong Wei, Yaqing Ma, Jing Xu, Shuijuan Hu, Hongyu Zheng, Yuelian Liu, Qiang Sun, Qiang Sun

“…The interaction between microorganisms and the host alters the tumor immune microenvironment, which provides a theoretical basis for OSCC immunotherapy.…”
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Morphological Characteristics and Identification of Key Genes Regulating Distyly Morph in <i>Primula vulgaris</i> by Xuan Wang, Hantao Sun, Yan Xu, Feng Cao, Yanlong Wang, Jianbin Ma, Jinfeng Li, Liu Liu, Ping Li, Xiaoman Zhang

“…DEGs such as <i>BoGH3B</i>, <i>SAUR21</i>, and <i>SAUR50</i> may be involved in the development of long and short styles, which in turn leads to the presentation of differences between long and short morphs. These results provide new insights into the molecular mechanism of <i>Primula</i>.…”
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Full-Length Transcriptomes Reconstruction Reveals Intraspecific Diversity in Hairy Vetch (<i>Vicia villosa</i> Roth) and Smooth Vetch (<i>V. villosa</i> Roth var. <i>glabrescens</i... by Weiyi Kong, Bohao Geng, Wenhui Yan, Jun Xia, Wenkai Xu, Na Zhao, Zhenfei Guo

“…A putative 3-dehydroquinate dehydratase/shikimate dehydrogenase (DHD/SDH) gene underwent strong positive selection and might regulate phenotypic differences between hairy vetch and smooth vetch. Overall, our study provides a vital characterization of two full-length transcriptomes in <i>Vicia villosa</i>, which will be valuable for their molecular research and breeding.…”
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Integrated mRNA and miRNA Omics Analyses Reveal Transcriptional Regulation of the Tolerance Traits by <i>Aquatica leii</i> in Response to High Temperature by Chao Liu, Jiapeng Li, Lihong Yan, Yuting Zhu, Zikun Li, Chengquan Cao, Yiping Wang

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WGCNA analysis reveals hub genes in the Hemarthria compressa roots in response to waterlogging stress by Wenwen Li, Xiaoli Zhou, Minghao Qu, Yuqian Zheng, Bingna Shen, Bing Zeng, Yanlong Feng, Kaiyue Pang, Jiahai Wu, Bing Zeng

“…The physiological indexes of H. compressa were measured, and transcriptome sequencing was carried out after 8 h and 24 h of waterlogging stress, with 0 h used as the control group. …”
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Exploring virulence and stress response in Entamoeba histolytica: insights from clinical strains by Yasuaki Yanagawa, Manu Sharma, Shinji Izumiyama, Upinder Singh

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Detecting the physiological and molecular mechanisms by which abscisic acid (ABA) regulates the consistency of sweet cherry fruit maturity by Qian Qiao, Bingxue Shen, Ke Lin, Dongzi Zhu, Po Hong, Lisi Zhang, Jiazheng Sun, Shan Sun, Yun Gao, Shizhong Zhang, Jiawei Wang, Qingzhong Liu

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Adaptation mechanisms of Brucella abortus to low magnesium ion stress by Hengtai Wang, Lang Lv, Yike Huang, Hui Jiang, Xiaowen Yang, Jiabo Ding, Liangquan Zhu, Lei Xu, Huaiming Sang, Jianxia Jiang, Nan Wang, Peng Li

“…Conclusions: In this study, a first description of the pattern of B. abortus genetic expression in response to low Mg2+ stress response provides insights into the intracellular behavior of B. abortus at the genetic level.…”
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Establishment of a leaf regeneration system and its molecular basis in Poplar 741 by Lingyun Liu, Mengying Sun, Xiaokun Qi, Jun Zhang, Min Jiang, Hongyu Cai, Minsheng Yang, Jinmao Wang

“…Endogenous hormone content and microscopic properties under different treatments matched the regeneration system. Transcriptomic analyses indicated that differentially expressed genes were enriched in pathways related to phenylpropanoid biosynthesis, starch and sucrose metabolism, and plant hormone signal transduction. …”
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