Comparison of the effects and mechanisms of astaxanthin, astaxanthin esters and astacene on high-fat diet-induced NAFLD by Chunhao Gao, Fangtian Chen, Nengyun Gong, Shiran Hu, Mengjia Zhu, Qingxin Zhou, Xiang Gao

“…While AXE displayed notable efficacy in modulating transcriptional profiles across both tissues. This study provides novel insights into the effects of astaxanthin derivatives in ameliorating NAFLD…”
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PLK3 weakens antioxidant defense and inhibits proliferation of porcine Leydig cells under oxidative stress by Chujie Chen, Jinyan He, Weixian Huang, Dong Xu, Zhaohui Li, Anqi Yang

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Transcriptomic and de novo proteomic analyses of organotypic entorhino-hippocampal tissue cultures reveal changes in metabolic and signaling regulators in TTX-induced synaptic plas... by Maximilian Lenz, Paul Turko, Pia Kruse, Amelie Eichler, Zhuo Angel Chen, Juri Rappsilber, Imre Vida, Andreas Vlachos

“…These data provide a valuable resource for future studies aiming to understand the orchestration of homeostatic plasticity by metabolic pathways in distinct cell types of the central nervous system.…”
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Detection of Different Patterns of Genome-Wide Gene Expression Disturbance in Three Nullisomy Lines in Allotetraploid <i>Brassica napus</i> by Shaolin Lei, Bo Wei, Qi Hu, Lang Liu, Feng Yu, Tuo Zeng, Xuye Du, Lei Gu, Hongcheng Wang

“…These findings shed light on the complex compensatory mechanisms that underlie aneuploidy in polyploid plants and provide valuable insights into how plants maintain genomic stability despite chromosomal loss.…”
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Mechanisms of HAHV-1 Interaction with Hemocytes in <i>Haliotis diversicolor supertexta</i>: An <i>In Vitro</i> Study by Mao-Le Wei, Ya-Nan Li, Jing-Li Wang, Cui-Ping Ma, Hui-Gang Kang, Pei-Jun Li, Xiang Zhang, Bo-Wen Huang, Chang-Ming Bai

“…Consequently, this study provides a valuable reference point for the investigation of virus−host interaction between HAHV-1 and abalone <i>in vitro</i>.…”
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Selenium Alleviates Cadmium Toxicity by Regulating Carbon Metabolism, AsA-GSH Cycle, and Cadmium Transport in <i>Glycyrrhiza uralensis</i> Fisch. Seedlings by Xuerong Zheng, Jiafen Luo, Xin Li, Chaoyue Zhang, Guigui Wan, Caixia Xia, Jiahui Lu

“…Experiments with 1 and 5 μM of Se revealed that 1 μM of Se provided the best protective effects. This concentration reduced the Cd²⁺ content in the roots of <i>G. uralensis</i>, while significantly increasing plant biomass, root length, SPAD value, and contents of K⁺, Ca²⁺, and S²⁻. …”
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Differential expression of sex regulatory genes in gonads of Astyanax mexicanus surface fish and cavefish by Kaitlyn A. Webster, Bethany Ponte, Hans Vasquez-Gross, Juli Petereit, John Hutchinson, Misty R. Riddle

“…Results We compared the ovary and testis transcriptome of surface fish and cavefish at juvenile and adult stages. …”
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Identification and Analysis of Circular RNAs in Mammary Gland from Yaks Between Lactation and Dry Period by Yilin Shi, Xiaoyun Wu, Guangyao Meng, Xiaoming Ma, Yongfu La, Pengjia Bao, Min Chu, Ping Yan

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Multiomics analysis uncovers host-microbiota interactions regulate hybrid vigor traits in geese by Hongyu Ni, Yuwei Yang, Chengwen Wang, Zongdi Li, Wuyang Liu, Yuxin Han, Hao Jiang, Hao Sun, Yumei Li, Yonghong Zhang

“…Integrated phenotypic, transcriptomic, gut microbiome and metabolomic analyses systematically revealed regulatory mechanisms underlying heterosis. …”
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The potential mechanisms of reciprocal regulation of gut microbiota-liver immune signaling in metabolic dysfunction-associated steatohepatitis revealed in multi-omics analysis by Zhaoyang Lu, Ligen Yu, Yun Bai, Yifeng Cui, Meixin Shi, Zhitao Li, Xiaoxue Li, Xin Zhong, Ye Jin, Can Wei

“…The multi-omics analysis provides valuable insights into the interactions among microbiota, circulating metabolites, and immune signaling. …”
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Multi-omics analysis reveals the mechanism for galactose metabolism in mutant Streptococcus thermophilus IMAU20551Y by Jiahui Tai, Haimin Hu, Jinhui Liu, Wenhui Lu, Tong Dan

“…This study provides a reference for genetic engineering modification of galactose-positive (Gal+) S. thermophilus, which is expected to be used as a starter for the production of low galactose fermented dairy products.…”
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Pollination-driven modulation of amino acid biosynthesis in plum: A multi-omics approach by Lijun Deng, Binshu Yuan, Xiaojun Jin, Yingying Xu, Yuhuan Feng, Xuan Zhang, Hui Zhang, Bo Xiong, Xun Wang, Guochao Sun, Mingfei Zhang, Siya He, Ling Liao, Zhihui Wang

“…Subsequently, we performed metabolomic and transcriptomic analyses of these fruits. The results showed that the total amino acid content in FF was significantly higher than that in FY throughout the fruit development period. …”
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MAPK and phenylpropanoid metabolism pathways involved in regulating the resistance of upland cotton plants to Verticillium dahliae by Mingli Zhang, Mingli Zhang, Yanjun Ma, Yuan Wang, Haifeng Gao, Sifeng Zhao, Yu Yu, Xuekun Zhang, Hui Xi

“…Lignin staining experiments further showed that the lignin content increased in both resistant and susceptible varieties after inoculation with V. dahliae.DiscussionThis study not only provides insights into the molecular mechanisms of resistance to Verticillium wilt in Xinjiang upland cotton but also offers important candidate gene resources for molecular breeding of resistance to Verticillium wilt in cotton.…”
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Multi-Omics Investigation of Fatty Acid Content Variations in Common Carp (<i>Cyprinus carpio</i>) Muscle: Integrating Genome, Transcriptome, and Lipid Profiling Data by Kaikuo Wang, Qi Wang, Yingjie Chen, Yiming Cao, Ran Zhao, Shuangting Yu, Xiaoqing Sun, Yan Zhang, Jiongtang Li

“…The optimal genomic selection programs provide novel and feasible perspectives to enhance FA content in common carp.…”
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Genomically Selected Genes Associated with a High Rate of Egg Production in Puan Panjiang Black-Bone Chickens by Xiaomeng Miao, Zhiying Huang, Jia Liu, Li Zhang, Yulong Feng, Yalan Zhang, Diyan Li, Zhonghua Ning

“…This study underscores the genetic diversity within this breed and provides valuable insights for future breeding programs to enhance egg production, supporting the sustainable development of this local resource.…”
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M6A methyltransferase METTL3 promotes glucose metabolism hub gene expression and induces metabolic dysfunction-associated steatotic liver disease (MASLD) by Shuowen Wang, Ziying Xu, Zijun Wang, Xiaoyu Yi, Jianxin Wu

“…Results METTL3 expression was significantly increased in the MASLD mouse model. Through our transcriptomic and proteomic analyses, we identified 848 genes with significant inconsistencies between the transcriptomic and proteomic datasets. …”
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Molecular and Metabolic Regulation of Flavonoid Biosynthesis in Two Varieties of <i>Dendrobium devonianum</i> by Ran Pu, Yawen Wu, Tian Bai, Yue Li, Xuejiao Li, Nengbo Li, Ying Zhou, Jingli Zhang

“…In this study, we integrated metabolome and transcriptome analyses to reveal metabolite and gene expression profiles of <i>D. devonianum,</i> both green (GDd) and purple-red (RDd) of semi-annual and annual stems. …”
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QTL Mapping and Candidate Gene Screening for Enhancing Oil Content in Silage Maize by Jianzhong Wu, Qi Wang, Weibo Han, Qian Zhao, Dequan Sun, Zhongbao Shen

“…Mining candidate genes within oil content-related quantitative trait loci (QTLs) can provide genetic resources and a theoretical foundation for cultivating high-oil silage maize varieties. …”
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InterTransViewer: a comparative description of differential gene expression profiles from different experiments by А. V. Tyapkin, V. V. Lavrekha, E. V. Ubogoeva, D. Yu. Oshchepkov, N. A. Omelyanchuk, E. V. Zemlyanskaya

“…Meta-analysis of transcriptomic data from different experiments has become increasingly prevalent due to a significantly increasing number of genome-wide experiments investigating gene expression changes under various conditions. …”
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Overexpression of StBBX14 Enhances Cold Tolerance in Potato by Heng Zhang, Mingjun Chen, Xiaobo Luo, Li Song, Fei Li

“…These findings illustrate that the <i>StBBX14</i> played an important role in cold stress in potato and provided a data basis for the genetic improvement of cold resistance traits of potato.…”
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