Integrated transcriptomic and proteomic analyses provide insights into the biosynthesis of Lycii fructus polysaccharides from different cultivation regions by Limei Tong, Yinxiu Jiang, Xinrun Zhang, Xia Zhang, Yihao Zheng, Qiheng Zhao, Sheng Yu, Wenhua Zhang, Gang Ren, Zhanping Chen, Yuling Zhao, Sheng Guo, Hui Yan, Shulan Su, Yang Pan, Jin-ao Duan, Fang Zhang

“…The integration of transcriptomic and proteomic analyses revealed enrichment of DEGs and DEPs involved in the biosynthesis pathway of LFPs, including UDPs, AXS, and UGDH. …”
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Integrative Analysis of Transcriptomics and Metabolomics Provides Insights into Meat Quality Differences in Hu Sheep with Different Carcass Performance by Xiaoxue Zhang, Liming Zhao, Huibin Tian, Zongwu Ma, Qi Zhang, Mengru Pu, Peiliang Cao, Deyin Zhang, Yukun Zhang, Yuan Zhao, Jiangbo Cheng, Quanzhong Xu, Dan Xu, Xiaobin Yang, Xiaolong Li, Weiwei Wu, Fadi Li, Weimin Wang

“…In our study, we conducted an integrative analysis of transcriptomics and metabolomics to investigate the molecular mechanisms underlying meat quality differences in Hu sheep with high (HHS, <i>n</i> = 10) and low (LHS, <i>n</i> = 10) carcass performance. …”
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Transcriptomic Analysis Provides New Insights into Oocyte Growth and Maturation in Greater Amberjack (<i>Seriola dumerili</i>) by Jiahui Yang, Xiaoying Ru, Yang Huang, Jinhui Wu, Tonglin Yang, Peipei Chen, Jin Li, Kunfeng Zhu, Chunhua Zhu

“…In this study, the ovary transcriptome profiles of greater amberjack at three different stages (stage II, III, and IV) were performed, and identified the genes and pathways that may play significant roles in the processes of follicle growth and maturation. …”
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Integrated metabolome and transcriptome analysis provides clues to fruit color formation of yellow, orange, and red bell pepper by Qiqin Xue, Qingxia Zhang, Aiai Zhang, Da Li, Yongguang Liu, Haicheng Xu, Qinghua Yang, Fengyan Liu, Tongyao Han, Xiaozhen Tang, Xiurong Zhang

“…Overall, the results not only provide important insights into carotenoid synthesis pathway, but also lay a solid base for revealing the mechanism of bell pepper color transformation.…”
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Integrated transcriptome and metabolome analyses provide molecular insights into the transition of flower color in the rose cultivar ‘Juicy Terrazza’ by Yun Xuan, Jie Ren, Zhu Chen, Dan Shi

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Comparative transcriptome analysis of different tissues of Hylomecon japonica provides new insights into the biosynthesis pathway of triterpenoid saponins by Bing He, Teng Xu, Shaowei Xu, Huqiang Fang, Qingshan Yang, Qingshan Yang

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Transcriptomics and proteomics provide insights into the adaptative strategies of Tibetan naked carps (Gymnocypris przewalskii) to saline-alkaline variations by Bingzheng Zhou, Ruichen Sui, Luxian Yu, Delin Qi, Shengyun Fu, Ying Luo, Hongfang Qi, Xiaohuan Li, Kai Zhao, Sijia Liu, Fei Tian

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Multiomics Provides a New Understanding of the Effect of Temperature Change on the Fermentation Quality of <i>Ophiocordyceps sinensis</i> by Zhengfei Cao, Tao Wang, Hui He, Yuling Li, Xiuzhang Li

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The Hedyotis diffusa chromosome-level genome and multi-omics analysis provide new insights into the iridoids biosynthetic pathway by Pengyu Chen, Pengyu Chen, Zhuang Huang, Zhuang Huang, Mingzhu Yin, Yu-xin Wen, Yu-xin Wen, Qi Jiang, Qi Jiang, Ping Huang, Rui Qian, Rui Qian, Xing Hong, Xing Hong, Kaojiang Zhu, Kaojiang Zhu, Benjiang Xiao, Benjiang Xiao, Meng Chen, Meng Chen, Shihao Li, Shihao Li, Fang Huang, Lin-tao Han, Lin-tao Han

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Integrated transcriptome and metabolome provide insights into flavonoid biosynthesis in 'P113', a new purple tea of Camellia tachangensis by Fang Li, Xinyue Deng, Zheng Huang, Zhifei Zhao, Caiyun Li, Qinfei Song, Yingqin He, Suzhen Niu

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Combined transcriptome and metabolome analysis provides insight into the ERF073 – Malic acid network in pakchoi under submergence stress by Dan-dan Xi, Lu Gao, Li-ao Ge, Hong-fang Zhu, Li-ming Miao, Ding-yu Zhang, Chang-wei Zhang, Ying Li, Yan-xiao Dong, Xi-lin Hou, Yu-ying Zhu, Zhao-hui Zhang, Xiao-feng Li

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Transcriptomic Analysis of Resistant and Susceptible Bombyx mori Strains Following BmNPV Infection Provides Insights into the Antiviral Mechanisms by Gang Li, Heying Qian, Xufang Luo, Pingzhen Xu, Jianhua Yang, Mingzhu Liu, Anying Xu

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Integrated Analysis of Transcriptomics and Proteomics Provides Insights into the Accumulation Mechanism of Ascorbic Acid in <i>Rosa roxburghii</i> Tratt by Pei Li, Bo Mu, Jing Liu, Wenqing Wu, Can He, Boxi Tan, Shijing Tang, Lu Yu

“…Furthermore, we conducted an integrated analysis of transcriptomic and proteomic data for the first time to investigate the mechanisms responsible for AsA accumulation in RRT. …”
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Integrative physiological and transcriptomic analysis provides insights on the molecular basis of ABA-enhanced drought tolerance in pear (Pyrus betulaefolia) by Guo-Ling Guo, An-Ran Luo, Yun-Hui Tan, Rui-Kang Yuan, Ting-Yue Luo, Pan-Pan Ma, Jun-Yu Zhan, Piao Han, Li Liu, Wei Heng, Zhenfeng Ye, Sheng Yang, Bing Jia

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Comparative transcriptomics and metabolomics provide insight into degeneration‐related physiological mechanisms of Morchella importuna after long‐term preservation by Ying Chen, Xuelian Cao, Liyuan Xie, Jie Tang, Lixu Liu, Di Wang, Xiang Wu, Tianhai Liu, Yang Yu, Yong Wang, Francis Martin, Weihong Peng, Hao Tan

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A high-quality genome of Actinidia eriantha provides new insight into ascorbic acid regulation by Guang-lian LIAO, Chun-hui HUANG, Dong-feng JIA, Min ZHONG, Jun-jie TAO, Xue-yan QU, Xiao-biao XU

“…The genome obtained in this study provides genomic resources for the genetic and breeding research of A. eriantha, and the constructed regulatory network can provide a public data platform for future research on kiwifruit.…”
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Multi-Omics Analysis Provides Insights into Green Soybean in Response to Cold Stress by Yanhui Lin, Guangping Cao, Jing Xu, Honglin Zhu, Liqiong Tang

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Reference genome provide insights into sex determination of silver aworana (Osteoglossum bicirrhosum) by Yi Liu, Chao Bian, Ka Yan Ma, Yexin Yang, Yuanyuan Wang, Chao Liu, Guochang Ouyang, Meng Xu, Jinhui Sun, Changwei Shao, Jiehu Chen, Qiong Shi, Xidong Mu

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Comparative transcriptome analysis provides a glance into the regulation of the Krüppel homolog 1 on the reproduction and diapause of the predatory ladybeetle, Coccinella septempunctata by Junjie Chen, Xiaoxiao Liu, Shunda Han, Maosen Zhang, Zhaohan Liu, Yuyan Li, Lisheng Zhang

“…In this study, we utilized RNA-Sequencing to investigate the transcriptomic changes in C. septempunctata following RNA interference targeting the Kr-h1 gene. …”
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Integrated Transcriptomics and Metabolomics Provide Insight into Degeneration-Related Molecular Mechanisms of <i>Morchella importuna</i> During Repeated Subculturing by Wenyan Huo, Xuelian He, Yu Liu, Liguang Zhang, Lu Dai, Peng Qi, Ting Qiao, Suying Hu, Pengpeng Lu, Junzhi Li

“…This study investigated <i>Morchella importuna</i> strain degeneration during repeated subculturing and employed metabolomics, transcriptomics, and other techniques to explore its molecular mechanisms. …”
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