Full-length transcriptome analysis of a bloom-forming dinoflagellate Scrippsiella acuminata (Dinophyceae) by Fengting Li, Caixia Yue, Yunyan Deng, Ying Zhong Tang

“…Our dataset provides a reference transcriptomic background for life history studies on dinoflagellates and will contribute to understanding molecular mechanisms underlying S. acuminata blooms.…”
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Host plant driven transcriptome plasticity in the salivary glands of the cabbage looper (Trichoplusia ni). by Loren J Rivera-Vega, David A Galbraith, Christina M Grozinger, Gary W Felton

“…The objective of this study was to determine how the labial salivary gland transcriptome varies according to the host plant on which the insect is feeding. …”
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Transcriptomic profiling of burn patients reveals key lactylation-related genes and their molecular mechanisms by Yang Li, Jizhong Ma, Yeping Wang, Weibin Zhan, Qian Wang

“…This study aimed to analyze the transcriptomic profiles of burn patients and identify lactylation-related genes as potential biomarkers or therapeutic targets.MethodsPeripheral blood transcriptome data of burn patients and controls were obtained from the GEO database. …”
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Evolutionary analysis of novel serine proteases in the venom gland transcriptome of Bitis gabonica rhinoceros. by Sakthivel Vaiyapuri, Simon C Wagstaff, Robert A Harrison, Jonathan M Gibbins, E Gail Hutchinson

“…<h4>Methodology and principal findings</h4>Four serine protease-encoding genes from the venom gland transcriptome of Bitis gabonica rhinoceros were amplified and sequenced. …”
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Drugs that reverse disease transcriptomic signatures are more effective in a mouse model of dyslipidemia by Allon Wagner, Noa Cohen, Thomas Kelder, Uri Amit, Elad Liebman, David M Steinberg, Marijana Radonjic, Eytan Ruppin

“…This holds in a tissue‐specific manner—treatments that reverse the transcriptomic signatures of the disease in a particular tissue are associated with positive physiological effects in that tissue. …”
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Unraveling the mechanism of fragrance release in Cestrum nocturnum through transcriptome and volatile compound profiling by Sitong Qiao, Anqi Ding, Tao Liu, Hangcheng Hu, Mengting Li, Jiyang Wang, Leixing Deng, Shiheng Lyu

“…Here, the floral substances and differential regulatory genes in the petals of C. nocturnum at night were explored by HS-SPME-GC/MS and transcriptome sequencing. Benzaldehyde, phenyl acetaldehyde and benzyl acetate were identified as the main floral scent substances involved in the phenylpropanoid biosynthesis pathway of C. nocturnum. …”
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Molecular insights into floral scent biosynthesis in Rosa laevigata through transcriptomic and metabolomic analyses by Jian Ru, Jian Ru, Wen-Bin Ju, Wen-Bin Ju, Liang-Ying Li, Heng-Ning Deng, Heng-Ning Deng, Zhen-Long Liang, Zhen-Long Liang, Zhong-Yu Tang, Zhong-Yu Tang, Jia Miao, Cheng Zhang, Xin-Fen Gao, Xin-Fen Gao

“…In this study, we conducted metabolomic and transcriptomic analyses to investigate the composition and abundance changes of VOCs in R. laevigata flowers at three developmental stages. …”
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Single‐Cell Simultaneous Metabolome and Transcriptome Profiling Revealing Metabolite‐Gene Correlation Network by Xiying Mao, Dandan Xia, Miao Xu, Yan Gao, Le Tong, Chen Lu, Weiqi Li, Runmin Xie, Qinghuai Liu, Dechen Jiang, Songtao Yuan

“…This design not only provides sufficient cytoplasm for SCM but also nicely keeps the cellular viability for the accurate transcriptomic analysis in the same cell. …”
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Comprehensive transcriptomic and metabolomic analysis revealed drought tolerance regulatory pathways in upland cotton by Fenglei Sun, Junhao Wang, Shiwei Geng, Yajun Liang, Zhaolong Gong, Ni Yang, Shuaishuai Qian, Nala Zhang, Xueyuan Li, Junduo Wang, Juyun Zheng

“…The results further deepen our understanding of the molecular mechanism of drought tolerance in cotton and provide new insights for molecular breeding of cotton.…”
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Transcriptome Analysis of Apple Leaves with Apple Necrotic Mosaic Virus-Associated Mosaic Symptoms by Dehang Gao, Fei Xing, Qin Yan, Zhixiang Zhang, Binhui Zhan, Meiguang Lu, Yunlong Ma, Hongqing Wang, Shifang Li, Jipeng Xie

“…In this study, we performed transcriptome analysis to investigate apple gene responses to AMD. …”
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Transcriptomic Insights into Gas6-Induced Placental Dysfunction: Gene Targets for Preeclampsia Therapy by Matthew Jackson, Trenton M. Gibson, Ethan Frank, Garrett Hill, Benjamin Davidson, Paul R. Reynolds, Benjamin T. Bikman, Brett E. Pickett, Juan A. Arroyo

“…Gas6 administration induces hallmark PE features, including hypertension, proteinuria, and significant alterations in placental gene expression. Transcriptomic analysis revealed changes in pathways related to extracellular matrix remodeling, interleukin signaling, and oxidative stress, highlighting their contribution to PE pathology. …”
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Developmental transcriptomics reveals stage-specific immune gene expression profiles in Spodoptera frugiperda by Guangmin Wang, Jia Ran, Chen Jia, Amr Mohamed, Jorge R. Paredes-Montero, Rasha Khalifah Al-Akeel, Liansheng Zang, Wei Zhang, Nemat O. Keyhani, Ioannis Eleftherianos

“…Validation via qRT-PCR confirmed these transcriptomic trends, highlighting the modulation of immunity throughout development. …”
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Comparative metabolome and transcriptome analysis of foxtail millet cultivars with high and low grain quality by Yiru Zhang, Xinjie Yao, Pengyu Tian, Canran Zhang, Xiaodong Liu, Hongying Li, Yuanhuai Han

“…This investigation employed integrated metabolomic and transcriptomic analyses to compare two contrasting cultivars - the elite variety Jingu 21 (JG21) and traditional landrace Niumaobai (NMB) - during two critical grain-filling stages. 552 metabolites were identified in both cultivars, with 144 showing differential abundance. …”
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Comparative Transcriptome Analysis Reveals the Effects of a High-Protein Diet on Silkworm Midgut by Xinyi Chen, Jiahao Li, Yuxi Shan, Qiaoling Wang, Pingzhen Xu, Heying Qian, Yangchun Wu

“…Moreover, the activities of SOD and NADH were enhanced in the midgut of the HPD 6% group. Our findings provide valuable insights into the wide-ranging effects of an HPD treatment in insects such as silkworms.…”
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Induction of Triploid Grass Carp (<i>Ctenopharyngodon idella</i>) and Changes in Embryonic Transcriptome by Zixuan E, Han Wen, Yingshi Tang, Mingqing Zhang, Yaorong Wang, Shujia Liao, Kejun Chen, Danqi Lu, Haoran Lin, Wen Huang, Xiaoying Chen, Yong Zhang, Shuisheng Li

“…Overall, this study demonstrates optimized conditions for inducing triploidy in grass carp via cold shock and provides insights into the transcriptomic changes that take place in cold shock-induced embryos, which could inform future grass carp genetic breeding programs.…”
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Transcriptomic and metabolic profiling reveals the effects of long-term microwave exposure on testicular tissue by Binwei Yao, Jing Zeng, Jingqi Shi, Yueyue Pang, Junqi Men, Yanyang Li, Heran Wang, Jing Liu, Wang Hui, Li Zhao, Chunlin Li, Ruiyun Peng, Jiao Fan

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Bovine lactoferrin drives cell cycle arrest and alters the transcriptomic profile of NSCLC cells by Jinxian Su, Yu Zhao, Mengtian Li, Guoxin Chen, Chun Liu, Adi Idris, Zhongren Ma, Haixia Zhang

“…Our study aims to untangle these mechanistic details to provide a biochemical and transcriptomic landscape in lung cancer cells treated with bLF. …”
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Establishment of interpretable cytotoxicity prediction models using machine learning analysis of transcriptome features by You Wu, Ke Tang, Chunzheng Wang, Hao Song, Fanfan Zhou, Ying Guo

“…Moreover, for the first time, Cytotoxicity Signature (CTS) genes were identified, which could provide additional clues for further study of mechanisms of action (MOA), especially for NTI compounds.…”
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Dynamic Transcriptomic and Cellular Remodeling Underlie Cuprizone-Induced Demyelination and Endogenous Repair in the CNS by Yantuanjin Ma, Tianyi Liu, Zhipeng Li, Wei Wei, Qiting Zhao, Shufen Wang

“…These findings provide insights into myelin repair mechanisms and highlight potential therapeutic targets for treating demyelinating diseases.…”
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Transcriptome Analysis Reveals Key Pathways and Genes Involved in Lodging Resistance of Upland Cotton by Yuan Wang, Ao Feng, Caiwang Zhao, Xiaomei Ma, Xinyu Zhang, Yanjun Li, Jie Sun

“…In this study, the morphological and physiological characteristics and transcriptome of two upland cotton varieties with different lodging resistance were compared. …”
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