FlyPhoneDB2: A computational framework for analyzing cell-cell communication in Drosophila scRNA-seq data integrating AlphaFold-multimer predictions by Mujeeb Qadiri, Ying Liu, Ah-Ram Kim, Myeonghoon Han, Eric Zhou, Austin Veal, Tzu-Chiao Lu, Hongjie Li, Yanhui Hu, Norbert Perrimon

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Personalized risk stratification in colorectal cancer via PIANOS system by Du Cai, Haoning Qi, Qiuxia Yang, Huayu Li, Chenghang Li, Chuling Hu, Baowen Gai, Xu Zhang, Yize Mao, Feng Gao, Xiaojian Wu

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Integrated artificial intelligence approach for well-log fluid identification in dual-medium tight sandstone gas reservoirs by Wurong Wang, Wurong Wang, Linbo Qu, Linbo Qu, Dali Yue, Dali Yue, Wei Li, Wei Li, Junlong Liu, Wujun Jin, Jialin Fu, Jialin Fu, Jiarui Zhang, Jiarui Zhang, Dongxia Chen, Dongxia Chen, Qiaochu Wang, Qiaochu Wang, Sha Li, Sha Li

“…Reservoir classification based on geological genetic mechanism significantly reduces data noise and prediction ambiguity, thereby improving the efficiency of model training.DiscussionThe final model is constructed by an ensemble method that integrates multiple sub-models, including fuzzy C-means clustering (FCM), gradient boosting decision tree (GBDT), backpropagation neural network (BPNN), random forests (RF), and light gradient boosting machines (LightGBM). …”
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Stratification system with dual human endogenous retroviruses for predicting immunotherapy efficacy in metastatic clear-cell renal cell carcinoma by Li Xu, Stephane Oudard, Catherine Sautes-Fridman, Xiaoping Su, Gabriel G. Malouf, Virginie Verkarre, Salma Kotti, Fangrong Yan, Yann-Alexandre Vano, Wolf Herve Fridman, Cheng-Ming Sun, Xiaofan Lu, Wenxuan Cheng

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Accurate and rapid single nucleotide variation detection in PCSK9 gene using nanopore sequencing by Ilaria Massaiu, Vincenza Valerio, Valentina Rusconi, Valentina Rusconi, Francesca Bertolini, Donato De Giorgi, Veronika A. Myasoedova, Paolo Poggio, Paolo Poggio

“…Twelve subjects were analyzed using different sequencing flow cells, basecalling models, and SNV calling algorithms. Sanger sequencing served as the reference for performance validation. …”
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A Machine Learning Platform for Isoform-Specific Identification and Profiling of Human Carbonic Anhydrase Inhibitors by Lisa Piazza, Miriana Di Stefano, Clarissa Poles, Giulia Bononi, Giulio Poli, Gioele Renzi, Salvatore Galati, Antonio Giordano, Marco Macchia, Fabrizio Carta, Claudiu T. Supuran, Tiziano Tuccinardi

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The role of artificial intelligence in promoting health and developing preventive strategies for diabetes by Ameneh Marzban

“…Moreover, challenges such as algorithmic bias, generalizability across diverse populations, and the necessity for clinician training must be carefully considered. …”
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