Generalizability of machine learning models for diabetes detection a study with nordic islet transplant and PIMA datasets by Dinesh Chellappan, Harikumar Rajaguru

Subjects: “…Early diabetes detection…”
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Copula-Based Bayesian Model for Detecting Differential Gene Expression by Prasansha Liyanaarachchi, N. Rao Chaganty

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Advancing Dermatomycosis Diagnosis: Evaluating a Microarray-Based Platform for Rapid and Accurate Fungal Detection—A Pilot Study by Vittorio Ivagnes, Elena De Carolis, Carlotta Magrì, Riccardo Torelli, Brunella Posteraro, Maurizio Sanguinetti

“…This study evaluates the EUROArray Dermatomycosis Platform, a microarray-based molecular assay, for its performance in identifying fungi causing dermatomycosis. …”
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Comparative analysis of hybrid-SNP microarray and nanopore sequencing for detection of large-sized copy number variants in the human genome by Catarina Silva, José Ferrão, Bárbara Marques, Sónia Pedro, Hildeberto Correia, Ana Valente, António Sebastião Rodrigues, Luís Vieira

“…In this work, we used nanopore sequencing technology to sequence 2 human cell lines at low depth of coverage to call copy number variations (CNV), and compared the results variant by variant with chromosomal microarray (CMA) results. Results We analysed sequencing data using CuteSV and Sniffles2 variant callers, compared breakpoints based on hybrid-SNP microarray, nanopore sequencing and Sanger sequencing, and analysed CNV coverage. …”
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Case of 7p22.1 Microduplication Detected by Whole Genome Microarray (REVEAL) in Workup of Child Diagnosed with Autism by Veronica Goitia, Marcial Oquendo, Robert Stratton

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DurdusTools—An Online Genetic Distance Calculation Tool for Efficient Variety Testing in Durum Wheat (<i>Triticum turgidum</i> L. subsp. <i>durum</i> (Desf.) Husn.) by Alexandra Ribarits, Svenja Bomers, Tadej Zerak, Oliver Alber, Jakob Seereiter, Antonio Escolano García, Ana Lázaro Somoza, Anna Pia Maria Giulini, Ferenc Somogyi, Sándor Kőrösi, Jutta Taferner-Kriegl

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Robust molecular subgrouping and reference-free aneuploidy detection in medulloblastoma using low-depth whole genome bisulfite sequencing by Dean Thompson, Jemma Castle, Martin Sill, Stefan M. Pfister, Simon Bailey, Debbie Hicks, Steven C. Clifford, Edward C. Schwalbe

“…We further assessed and optimised reference-free aneuploidy detection using low-pass WGBS and assessed concordance with microarray-derived calls. …”
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Silver coated porous silicon microarray SERS platform for detecting aflatoxin B1 fumonisin B1 and ochratoxin A by Rohit Kumar Singh, Narsingh R. Nirala, Sudharsan Sadhasivam, Divagar Muthukumar, Edward Sionov, Giorgi Shtenberg

“…Herein, we present a newly developed nanostructured microarray based on silver-coated porous silicon (Ag-pSi) used as a surface-enhanced Raman scattering (SERS) transducer. …”
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Effective detection of 148 cases chromosomal mosaicism by karyotyping, chromosomal microarray analysis and QF-PCR in 32,967 prenatal diagnoses by Yi Deng, Lan Zeng, Zhiling Wu, Jin Wang, Mengling Ye, Chun Chen, Ping Wei, Danni Wang, Guangming Deng, Shuyao Zhu

“…Methods A total of 148 fetuses diagnosed with chromosomal mosaicism by karyotyping with copy number variant sequencing (CNV-seq)/ chromosomal microarray analysis (CMA) and quantitative fluorescent polymerase chain reaction (QF-PCR) were selected, and the results from three the methods were compared and further analyzed. …”
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Whole genome uniparental isodisomy detected using single nucleotide polymorphism (SNP) microarray in molar pregnancy: a case report by Onyinye O. Okonkwo, Veronica Ortega, Sheila Kane, Galina Aldrete, Paulina Ramirez, Philip T. Valente, Gopalrao V.N. Velagaleti

“…High-resolution SNP microarray studies detected whole genome uniparental isodisomy. …”
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Gene selection based on adaptive neighborhood-preserving multi-objective particle swarm optimization by Sumet Mehta, Fei Han, Muhammad Sohail, Bhekisipho Twala, Asad Ullah, Fasee Ullah, Arfat Ahmad Khan, Qinghua Ling

Subjects: “…Microarray gene selection…”
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Ensemble Algorithm Based on Gene Selection, Data Augmentation, and Boosting Approaches for Ovarian Cancer Classification by Zne-Jung Lee, Jing-Xun Cai, Liang-Hung Wang, Ming-Ren Yang

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Optimized T7 Amplification System for Microarray Analysis by C. Pabón, Z. Modrusan, M.V. Ruvolo, I.M. Coleman, S. Daniel, H. Yue, L.J. Arnold, M.A. Reynolds

“…Glass cDNA microarray technologies offer a highly parallel approach for profiling expressed gene sequences in disease-relevant tissues. …”
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A two stage grading approach for feature selection and classification of microarray data using Pareto based feature ranking techniques: A case study by Rasmita Dash

“…High dimensional search space in microarray data with large number of genes and few dozen of samples increases the complexity of analysis of such databases. …”
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Evaluating the Nuclear Reaction Optimization (NRO) Algorithm for Gene Selection in Cancer Classification by Shahad Alkamli, Hala Alshamlan

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Analysis of a Series of 26 Cases With Prenatal Skeletal Dysplasia via Multiplatform Genetic Detection by Li‐min Cui, Hua‐ying Hu, Xiao‐mei Zhai, Ming‐fei Qi, Yan‐ming Liu, Cong‐ying Han, Jing Zhang, Ming Shen, Yu‐lan Xiang, Wen‐qi Chen, Kai Yang, Dong‐liang Zhang, Huan‐xia Xing

“…Materials and Methods In this study, we recruited 26 cases of SD and analyzed them with a designed sequential genetic detection. Chromosome karyotyping, microarray analysis (CMA), and whole exome sequencing (WES) techniques are performed as needed. …”
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BIMSSA: enhancing cancer prediction with salp swarm optimization and ensemble machine learning approaches by Pinakshi Panda, Sukant Kishoro Bisoy, Amrutanshu Panigrahi, Abhilash Pati, Bibhuprasad Sahu, Zheshan Guo, Haipeng Liu, Prince Jain

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Microarray-Based Cancer Diagnosis with Artificial Neural Networks by Markus Ringnér, Carsten Peterson

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Fast Spot Locating for Low-Density DNA Microarray by MinGin Kim, Jongwon Kim, Sun-Hee Kim, Jong-Dae Kim

“…Low-density DNA microarrays are crucial in molecular diagnostics due to their cost-effectiveness and high sensitivity. …”
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Fabrication of DNA Microarrays Using Unmodified Oligonucleotide Probes by Douglas Ruben Call, Darrell P. Chandler, Fred Brockman

“…Microarrays printed on glass slides are often constructed by covalently linking oligonucleotide probes to a derivatized surface. …”
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