Catalyst: Fast and flexible modeling of reaction networks. by Torkel E Loman, Yingbo Ma, Vasily Ilin, Shashi Gowda, Niklas Korsbo, Nikhil Yewale, Chris Rackauckas, Samuel A Isaacson

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Applicability of synthetic aperture radar in remote sensing flood area calculation by Yanyu Liu

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Light-induced above-room-temperature Chern insulators in group-IV Xenes by Zhe Li, Haijun Cao, Sheng Meng

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Nuclear deformation by microtubule molecular motors. by Naruemon Rueangkham, Miguel Valle-Inclán Cabello, Franziska Lautenschläger, Rhoda J Hawkins

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A personalized query method for spatial keywords in indoor environments by Liping Zhang, Chunhong Li, Song Li

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Reconstruction of Tissue-Specific Metabolic Networks Using CORDA. by André Schultz, Amina A Qutub

“…To interpret this complexity, computational modeling becomes an essential experimental tool. …”
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Application research of 3D virtual interactive technology in interactive teaching of arts and crafts by Mingqi Yao

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Adaptation optimizes sensory encoding for future stimuli. by Jiang Mao, Constantin A Rothkopf, Alan A Stocker

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ReproPhylo: An Environment for Reproducible Phylogenomics. by Amir Szitenberg, Max John, Mark L Blaxter, David H Lunt

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Storm: Incorporating transient stochastic dynamics to infer the RNA velocity with metabolic labeling information. by Qiangwei Peng, Xiaojie Qiu, Tiejun Li

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Assessing digital transformation maturity in higher education institutions: a correlational analysis by actors and dimensions by Jessie Bravo-Jaico, Gisella Luisa Elena Maquen-Niño, Nilton Germán, Carlos Valdivia, Roger Alarcón, Janet Aquino, Oscar Serquén

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Energy optimization induces predictive-coding properties in a multi-compartment spiking neural network model. by Mingfang Zhang, Raluca Chitic, Sander M Bohté

“…Predictive coding is a prominent theoretical framework for understanding hierarchical sensory processing in the brain, yet how it could be implemented in networks of cortical neurons is still unclear. …”
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Connecting macroscopic observables and microscopic assembly events in amyloid formation using coarse grained simulations. by Noah S Bieler, Tuomas P J Knowles, Daan Frenkel, Robert Vácha

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OrgaCCC: Orthogonal graph autoencoders for constructing cell-cell communication networks on spatial transcriptomics data. by Xixuan Feng, Shuqin Zhang, Limin Li

“…Cell-cell communication (CCC) is a fundamental biological process essential for maintaining the functionality of multicellular organisms. …”
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Gauge fixing for sequence-function relationships. by Anna Posfai, Juannan Zhou, David M McCandlish, Justin B Kinney

“…Quantitative models of sequence-function relationships are ubiquitous in computational biology, e.g., for modeling the DNA binding of transcription factors or the fitness landscapes of proteins. …”
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Research and application of optimization of physical education training model based on multi-objective differential evolutionary algorithm by Man Wu

“…With the development of computer science, various algorithm models are gradually applied in various fields of life. …”
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A review on organ deformation modeling approaches for reliable surgical navigation using augmented reality by Zheng Han, Qi Dou

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Efficient cluster center optimization: A novel hybrid metaheuristic by Saeideh Barkhordari Firozabadi, Seyed Abolfazl Shahzadeh Fazeli, Jamal Zarepour Ahmadabadi, Seyed Mehdi Karbassi

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A novel solid waste instance creation for an optimized capacitated vehicle routing model using discrete smell agent optimization algorithm by Ahmed T. Salawudeen, Olusesi A. Meadows, Basira Yahaya, Muhammed B. Mu'azu

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BIDS apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods. by Krzysztof J Gorgolewski, Fidel Alfaro-Almagro, Tibor Auer, Pierre Bellec, Mihai Capotă, M Mallar Chakravarty, Nathan W Churchill, Alexander Li Cohen, R Cameron Craddock, Gabriel A Devenyi, Anders Eklund, Oscar Esteban, Guillaume Flandin, Satrajit S Ghosh, J Swaroop Guntupalli, Mark Jenkinson, Anisha Keshavan, Gregory Kiar, Franziskus Liem, Pradeep Reddy Raamana, David Raffelt, Christopher J Steele, Pierre-Olivier Quirion, Robert E Smith, Stephen C Strother, Gaël Varoquaux, Yida Wang, Tal Yarkoni, Russell A Poldrack

“…Previous containerized data processing solutions were limited to single user environments and not compatible with most multi-tenant High Performance Computing systems. …”
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