Software Toolchain for Large-Scale RE-NFA Construction on FPGA by Yi-Hua E. Yang, Viktor K. Prasanna

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On the Performance of the Current MANET Routing Protocols for VoIP, HTTP, and FTP Applications by Waheb A. Jabbar, Mahamod Ismail, Rosdiadee Nordin

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The Modular Organization of Protein Interactions in Escherichia coli. by José M Peregrín-Alvarez, Xuejian Xiong, Chong Su, John Parkinson

“…Escherichia coli serves as an excellent model for the study of fundamental cellular processes such as metabolism, signalling and gene expression. …”
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Affinity Coefficient for Clustering Autoregressive Moving Average Models by Ana Paula Nascimento, Alexandra Oliveira, Brígida Mónica Faria, Rui Pimenta, Mónica Vieira, Cristina Prudêncio, Helena Bacelar-Nicolau

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Viral phylodynamics. by Erik M Volz, Katia Koelle, Trevor Bedford

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Metabolic network segmentation: A probabilistic graphical modeling approach to identify the sites and sequential order of metabolic regulation from non-targeted metabolomics data. by Andreas Kuehne, Urs Mayr, Daniel C Sévin, Manfred Claassen, Nicola Zamboni

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The (in)dependence of alternative splicing and gene duplication. by David Talavera, Christine Vogel, Modesto Orozco, Sarah A Teichmann, Xavier de la Cruz

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A Reconfigurable System Approach to the Direct Kinematics of a 5 D.o.f Robotic Manipulator by Diego F. Sánchez, Daniel M. Muñoz, Carlos H. Llanos, José M. Motta

“…Additionally, the processing time of the hardware architecture was compared with the same formulation implemented in software, using the PowerPC (FPGA embedded processor), demonstrating that the hardware architecture speeds-up by factor of 1298 the software implementation.…”
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Hybrid Spectrum Sensing Using Neural Network–Based MF and ED for Enhanced Detection in Rayleigh Channel by Arun Kumar, Nishant Gaur, Aziz Nanthaamornphong

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Unraveling charge effects on interface reactions and dendrite growth in lithium metal anode by Genming Lai, Yunxing Zuo, Chi Fang, Zongji Huang, Taowen Chen, Qinghua Liu, Suihan Cui, Jiaxin Zheng

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First-principles Hubbard parameters with automated and reproducible workflows by Lorenzo Bastonero, Cristiano Malica, Eric Macke, Marnik Bercx, Sebastiaan Huber, Iurii Timrov, Nicola Marzari

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Synthetic population generation with public health characteristics for spatial agent-based models. by Emma Von Hoene, Amira Roess, Hamdi Kavak, Taylor Anderson

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Quantifying the relative contributions of divisive and subtractive feedback to rhythm generation. by Joël Tabak, John Rinzel, Richard Bertram

“…This computational method can be used to analyze the role of negative feedback processes in a wide range of biological rhythms.…”
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Boltzmann energy-based image analysis demonstrates that extracellular domain size differences explain protein segregation at immune synapses. by Nigel J Burroughs, Karsten Köhler, Vladimir Miloserdov, Michael L Dustin, P Anton van der Merwe, Daniel M Davis

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Multi-resource joint management strategy for 5 G network slicing based on POMDP by Yale Li

“…Given this, to achieve joint optimization management such as computing resources and bandwidth resources, reduce network latency, and improve throughput and resource utilization, a network slicing resource management model based on partial observation Markov decision process is proposed. …”
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Subgraphs of functional brain networks identify dynamical constraints of cognitive control. by Ankit N Khambhati, John D Medaglia, Elisabeth A Karuza, Sharon L Thompson-Schill, Danielle S Bassett

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Using Cohen Sutherland Line Clipping Algorithm to Generate 3D Models from 2D by Marah Taha

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Parallel Gaussian Elimination Method by Muhammad Muhammad Ali

“…Most of these models are time-consuming when executed and processed in the sequential microprocessor computers. …”
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Innovative Hardware Accelerator Architecture for FPGA-Based General-Purpose RISC Microprocessors by Ehsan Ali

“…Reconfigurable computing (RC) theory aims to take advantage of the flexibility of general-purpose processors (GPPs) alongside the performance of application specific integrated circuits (ASICs). …”
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High Performance Biological Pairwise Sequence Alignment: FPGA versus GPU versus Cell BE versus GPP by Khaled Benkrid, Ali Akoglu, Cheng Ling, Yang Song, Ying Liu, Xiang Tian

“…This paper explores the pros and cons of reconfigurable computing in the form of FPGAs for high performance efficient computing. …”
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