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    A multi-state model of the CaMKII dodecamer suggests a role for calmodulin in maintenance of autophosphorylation. by Matthew C Pharris, Neal M Patel, Tyler G VanDyk, Thomas M Bartol, Terrence J Sejnowski, Mary B Kennedy, Melanie I Stefan, Tamara L Kinzer-Ursem

    Published 2019-12-01
    “…CaMKII activity is known to regulate dynamic shifts in the size and signaling strength of neuronal connections, a process known as synaptic plasticity. Increasingly, computational models are used to explore synaptic plasticity and the mechanisms regulating CaMKII activity. …”
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    Interrogation of the protein-protein interactions between human BRCA2 BRC repeats and RAD51 reveals atomistic determinants of affinity. by Daniel J Cole, Eeson Rajendra, Meredith Roberts-Thomson, Bryn Hardwick, Grahame J McKenzie, Mike C Payne, Ashok R Venkitaraman, Chris-Kriton Skylaris

    Published 2011-07-01
    “…The breast cancer suppressor BRCA2 controls the recombinase RAD51 in the reactions that mediate homologous DNA recombination, an essential cellular process required for the error-free repair of DNA double-stranded breaks. …”
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    DySCo: A general framework for dynamic functional connectivity. by Giuseppe de Alteriis, Oliver Sherwood, Alessandro Ciaramella, Robert Leech, Joana Cabral, Federico E Turkheimer, Paul Expert

    Published 2025-03-01
    “…Moreover, the dFC community has not been using the most efficient algorithms to compute and process the matrices efficiently, which has prevented dFC from showing its full potential with high-dimensional datasets and/or real-time applications. …”
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    How math shapes the world of life science animation by Rafael Oliveira, Evellyn Araujo Dias, Evellyn Araujo Dias, Ricardo Santos, Ricardo Santos, Vinicius Cotta-De-Almeida, José Aguiar Coelho Nt, José Aguiar Coelho Nt, José Aguiar Coelho Nt, Luiz Anastácio Alves

    Published 2025-07-01
    “…We synthesized findings from various studies to underscore the proven advantages of this new teaching tool, and by reviewing them, we reaffirm that animations have a demonstrable impact on improving the learning experience, making complex physiological processes more comprehensible and engaging. This highlights the critical role of animations as a pedagogical tool in science classrooms, and emphasizes the importance of understanding the mathematical and computational principles that support their creation. …”
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    ScITree: Scalable Bayesian inference of transmission tree from epidemiological and genomic data. by Hannah Waddel, Katia Koelle, Max S Y Lau

    Published 2025-06-01
    “…In summary, our method provides a computationally-efficient, highly scalable, accurate modeling framework for inferring the joint spatio-temporal dynamics of epidemiological and evolutionary processes, facilitating timely and effective outbreak responses in space and time. …”
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    MeetSafe: enhancing robustness against white-box adversarial examples by Ruben Stenhuis, Dazhuang Liu, Yanqi Qiao, Mauro Conti, Manos Panaousis, Kaitai Liang

    Published 2025-08-01
    “…Finally, MeetSafe constructs a Gaussian Mixture Model (GMM) with the processed features and detects AEs if it is seen as a local outlier, shown by a low density from GMM. …”
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    Intelligent rehabilitation in an aging population: empowering human-machine interaction for hand function rehabilitation through 3D deep learning and point cloud by Zhizhong Xing, Zhizhong Xing, Zhizhong Xing, Zhijun Meng, Gengfeng Zheng, Guolan Ma, Lin Yang, Lin Yang, Xiaojun Guo, Li Tan, Yuanqiu Jiang, Huidong Wu

    Published 2025-05-01
    “…Human-machine interaction and computational neuroscience have brought unprecedented application prospects to the field of medical rehabilitation, especially for the elderly population, where the decline and recovery of hand function have become a significant concern. …”
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