Near telomere-to-telomere genome assembly of Camellia pitardii by Zhiyuan Lv, Jiao Wang, Ling Zhou, Shihui Zou, Lijiao Ai

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A chromosome-level genome assembly of Gray’s grenadier anchovy, Coilia grayii by Zhenqiang Fu, Junrou Huang, Li Wang, Xuanguang Liang, Qinglong Chen, Yan Hu, Jia Liu, Jianguo Lu

“…The genome contains 324.19 Mb of repetitive sequences, and 29,496 protein-coding genes were predicted, with 29,395 functionally annotated. BUSCO analysis revealed that 95.2% of the 3,640 benchmarking genes were complete, underscoring the high quality of the assembly. …”
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Near-complete reference genome assembly of Hoya carnosa by Yanfeng Kuang, Kunyue Ouyang, Meng Xia, Chao Feng, Ming Kang

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The high-quality telomere-to-telomere genome assembly of the earthworm (Amynthas aspergillum) by Guangquan Peng, Yanghe Qin, Zhiming Yan, Mingwei He, Yucheng Zhao, Neng Jiang, Changhong Wei

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Chromosome-level genome assembly of a stored-product psocid, Liposcelis tricolor (Psocodea: Liposcelididae) by Shi-Die Jiang, Yu-Ang Chen, Sheng-Yuan Sun, Guy Smagghe, Jin-Jun Wang, Dan-Dan Wei

“…A total of 91.49 Mb of repetitive sequences, accounting for 38.84% of the total genome, were annotated, and 15,647 protein-coding genes were predicted, with 88.17% functionally annotated. Additionally, we identified 25 typical sex-determining genes based on the genomic data. …”
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Pre-pandemic artificial MERS analog of polyfunctional SARS-CoV-2 S1/S2 furin cleavage site domain is unique among spike proteins of genus Betacoronavirus by Andreas Martin Lisewski

“…As the evolutionarily closest betacoronaviruses outside of the SARS-CoV-2 clade lack all its three functional motifs, these data extend—beyond natural evolution and zoonosis—the current view on SARS-CoV-2 pre-pandemic origins by presenting the analogous S1/S2 MERS-MA30 sequence domain as a precise molecular blueprint for SARS-CoV-2.…”
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Chromosome-level genome assembly of the threatened ornamental plant Hibiscus yunnanensis by Bishal Gurung, Jiani Li, Dongming Fang, Qiongqiong Lin, Xing Guo, Gao Chen

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Chromosome-level Genome Assembly of the Halophytic Turfgrass Zoysia macrostachya by Hyeonseon Park, Eunji Bae, Jae Gyeong Jung, Bae Young Choi, Tae-Ho Lee, Donghwan Shim

“…The gene annotation showed 97.1% complete BUSCOs and 86.92% functionally characterized genes. Macrosynteny analysis highlighted highly collinear relationships with related species, providing a foundational understanding of the Z. macrostachya genomic structure. …”
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A Dataset for Investigations of Amine-Impregnated Solid Adsorbent for Direct Air Capture by Eryu Wang, Liping Luo, Jiachuan Wang, Jiaxin Dai, Shuangyin Li, Lei Chen, Jia Li

“…Existing literature serves as a valuable source for the investigation of amine-functionalized solid adsorbents. This study selected 52 articles from bibliographic platforms using GPT-assisted data source screening. …”
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Chromosome-level genome assembly of Sinocyclocheilus jii based on PacBio HiFi and Hi-C sequencing by Jie Zhu, Chunqing Li, Longting Wu, Yongkang You, Ziheng Sheng, Mengjiao Fu, Heng Xiao, Shanyuan Chen

“…The completeness of the chromosome-level assembly was estimated at 98.9% by BUSCO analysis. Genome annotation identified 855.5 Mb of repetitive sequences and predicted a total of 52,867 protein-coding genes, of which 51,932 genes were functionally annotated. …”
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An integrated transcriptome, metabolome, and microbiome dataset of Populus under nutrient-poor conditions by Jiadong Wu, Dongyan He, Yue Wang, Sijia Liu, Yuxin Du, Haofei Wang, Shuxian Tan, Deqiang Zhang, Jianbo Xie

“…Here, we generated a comprehensive dataset, including 27 root transcriptomes, 27 root metabolomes, and 54 bulk or rhizosphere soil 16S rRNA amplicons across nine poplar species from four sections grown in nutrient-poor natural soil, along with eleven growth phenotype data. We provided a thorough description of this dataset, followed by a comprehensive co-expression network analysis example that broke down the wall of the four-way relationship between plant gene-metabolite-microbe-phenotype, thus identifying the links between plant gene expression, metabolite accumulation, growth behavior, and rhizosphere microbiome variation under nutrient-poor conditions. …”
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Chromosome-level genome assembly and annotation of Amur Pike (Esox reichertii) by Yuyong Zhang, Yongquan Zhang, Tangbin Huo, Gerel Qogt, Ping Zhang, Huiping Zhang, Zhiying Jia

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Scaffold-level genome assembly of Fusarium neocosmosporiellum strain CA18-1 by Le Wang, Ruifang Jia, Jianjun Hao, Zhengqiang Chen, Xiaoluo Zhang, Na Wang, Shengze Wang, Yuanyuan Zhang, Kejian Lin

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De novo assembly of a near-complete genome of aquatic vegetable Zizania latifolia in the Yangtze River Basin by Yao Zhao, Li-bing Liao, Zi-wei Zhu, Li-dong Zhang, Zi-dong Xiong, Zhi-ping Song, Ning Yan, Ai-wen Zhong, Jian Zhang, Cheng-chuan Zhou, Jun Rong

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Underground well water level observation grid dataset from 2005 to 2022 by Mengran Wang, Jiaqi Yao, Huanyu Chang, Rong Liu, Nan Xu, Zihua Liu, Haiying Gong, Hengliang Zheng, Jinke Wang, Xueer Guo, Yongqiang Cao, Yong Zhao, Hui Lu

“…Abstract Groundwater, a vital hydrological cycle component, is essential in sustaining ecosystem functions and human livelihoods. The dataset presented herein, derived from the China Geological Environment Monitoring Groundwater Level Yearbook (2005–2022) compiled by the China Geological Environment Monitoring Institute, integrates long-term observational data from groundwater monitoring wells across China. …”
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A high-quality chromosome-level genome assembly and annotation of the giant freshwater prawn (Macrobrachium rosenbergii) by Lingyun Yu, Haiyang Liu, Jie Wei, Wanchang Zhang, Kunhao Hong, Huarong Li, Qiaoyan Zhou, Qiyao Su, Bai Liufu, Xinping Zhu, Yakun Wang

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Chromosome-level and haplotype-resolved genome assembly of Bougainvillea glabra by Lan Lan, Haiyan Li, Shisong Xu, Yueting Xu, Qingyun Leng, Linbi Zhang, Linqiao Wu, Junmei Yin, Zhiqiang Wu, Junhai Niu

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A chromosome-level reference genome assembly of the Small snakehead (Channa asiatica) by Haiyang Liu, Jiafeng Liu, Tongxin Cui, Jin Zhang, Qing Luo, Shuzhan Fei, Kunci Chen, Xinping Zhu, Mi Ou, Jian Zhao

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Quantifying compatibility mechanisms in traditional Chinese medicine with interpretable graph neural networks by Jingqi Zeng, Xiaobin Jia

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State of nature 2023 terrestrial and freshwater animal dataset for the United Kingdom and its constituent countriesZenodo by Fiona Burns, Simone Mordue, Nida Al-Fulaij, Philipp Boersh-Supan, Katherine L. Boughey, Philip Briggs, Mark A. Eaton, Colin Harrower, Angus C. Jackson, Steve Langton, Francesca Mancini, David Noble, Chris R. Shortall, Chloë A. Smith, Robin J. Pakeman

“…Trend data was also calculated for each constituent country: England, Northern Ireland, Scotland and Wales for reduced sets of species.Trends in abundance data were generally created from the analysis of repeat counts at specific sites. …”
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