A standardized fold change method for microarray differential expression analysis used to reveal genes involved in acute rejection in murine allograft models by Weichen Zhou, Yi Wang, Masayuki Fujino, Leming Shi, Li Jin, Xiao‐Kang Li, Jiucun Wang

“…We had difficulty in identifying genes related to acute rejections expressed in both heart and liver transplantation models using two standard methodologies: Student's t test and linear models for microarray data (Limma). Here we describe a new method, standardized fold change (SFC), for differential analysis of microarray data. …”
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Integrative analyses reveal signaling pathways underlying familial breast cancer susceptibility by Stephen R Piccolo, Laura M Hoffman, Thomas Conner, Gajendra Shrestha, Adam L Cohen, Jeffrey R Marks, Leigh A Neumayer, Cori A Agarwal, Mary C Beckerle, Irene L Andrulis, Avrum E Spira, Philip J Moos, Saundra S Buys, William Evan Johnson, Andrea H Bild

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Local Strain Rate and Curvature Dependences of Scalar Dissipation Rate Transport in Turbulent Premixed Flames: A Direct Numerical Simulation Analysis by Y. Gao, N. Chakraborty, N. Swaminathan

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An Analysis of Islamic Education Values in Serat Wedhatama by Kanjeng Gusti Pangeran Adipati Arya (K.G.P.A.A) Mangkunegara by Rahman Afandi, Adie Setiawan

“…Employing a descriptive qualitative method with a philological approach and content analysis, data were collected through an in-depth literature review of the Serat Wedhatama manuscript and related scholarly works. …”
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Serum α-Klotho mediates the association between blood toluene and BUN: A cross-sectional study from NHANES 2013–2016 by Zhu Tian, Cheng Guo, Xiaorui Zhang, Kai Liu, Juan Xie

“…Blood urea nitrogen (BUN) is a by-product of protein metabolism and is commonly used as an indicator to assess renal function. α-Klotho protein is detected mainly in the kidney and has antioxidant, anti-aging, and nephroprotective properties. …”
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Genome-wide identification and expression analysis of growth-regulating factor (GRF) and GRF-interacting factor (GIF) gene families in Castanea mollissima by WANG Xiangyu, TIAN Yujuan, LI Yun, WANG Dongsheng, WANG Xuan, GUO Chunlei, LIU Jing, ZHANG Hai’e, ZHANG Jingzheng, YU Liyang

“…Transcriptome data analysis showed that CmGRF3 and CmGIF2 were consistently highly expressed in female flowers, while almost not in male flowers (FPKM<1). …”
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Integrated approach for estimating climate change impacts on CO2 sink capacity of inland waterbodies using hydrodynamic modelling and GIS analysis by Hanady H. Khalil, Mohamed A. Abdrabo, Mahmoud A. Hassaan, Mohamed M. Elshemy

“…For this purpose, an integrated approach combining CO2 solubility modelling, hydrodynamic simulations (Delft3D-FLOW) and GIS analysis was employed. According to the developed approach, CO2 solubility under variable temperature and salinity is mathematically modelled and this model is further used with the developed hydrodynamic model data for Wadi El-Rayan Lakes (temperature, salinity and water depth) to estimate their CO2 sink capacities. …”
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Frequency of chemotherapy Induced Gait Deviations in Breast Cancer Female Survivors by Fatima Zahid, Hufsa Tariq, Hafiz Muhammad Asim

“…Data collection was done by videotaping patient gait from multiple views and using JAKC Observational Gait Analysis. …”
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How Satisfaction Research Contributes to the Optimization of Urban Green Space Design—A Global Perspective Bibliometric Analysis from 2001 to 2024 by Shaoying Zhang, Mastura Adam, Norafida Ab Ghafar

“…These findings emphasize the importance of data-driven and innovative planning strategies for enhancing residents’ well-being, tourism, and urban sustainability. (3) Research on satisfaction with urban green spaces has shifted from a singular to a more diversified focus, contributing to the optimization of urban green spaces through four main aspects: residents’ needs, ecological functions, management strategies, and research approaches. …”
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Synthesis and characterization of copper nanoparticle of Solanum Virginianum and Coccinia Grandis extract: A comparative study of thermal behavior by Muthuselvi Raghunathan, Prema Anbarasu, Vashantha Ramaswami

“…The volatile compounds that the sample released was analyzed using TGA in conjunction with Fourier transform infrared spectroscopy (FTIR). From the FTIR data obtained it showed that the CG-CuNPs and SV-CuNPs both included functional molecular structure. …”
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Real-world clinical insights and aqueous humor biomarker analysis of diabetic macular edema subtypes classified by OCT following intravitreal injections by Liangzhang Tan, Shoukuan Liu, Wenrui Linghu, Yifeng Ke, Yongtao Li, Emmanuel Eric Pazo, Xinjun Ren

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Integrating environmental and LULC drivers of groundwater droughts in groundwater-dependent ecosystems: a machine learning (XGBoost)-SEM analysis with ecosystem implications by Kawawa Banda, Christopher Shilengwe, Imasiku Nyambe

“…Conclusions This study is novel in its application of XGBoost and SEM to unravel the complex nexus between climate variability, LULC, and groundwater dynamics within an ecosystem context, under data-scarcity conditions. This understanding is not only critical for sustaining groundwater availability but also for preserving the integrity and functioning of groundwater-dependent ecosystems.…”
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Temporal Evolution of Bradford Curves in Academic Library Contexts by Haobai Xue

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Novel exosome-associated LncRNA model predicts colorectal cancer prognosis and drug response by Chi Zhou, Qian Qiu, Xinyu Liu, Tiantian Zhang, Leilei Liang, Yihang Yuan, Yufo Chen, Weijie Sun

“…Abstract Background Exosomes are extracellular vesicles that carry various biological substances and have potential as functional mediators in cancers. However, little is known about special molecules in colorectal cancer (CRC) exosomes and their immunological functions. …”
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Depictions of older adults residing in nursing homes: a Goffman-inspired thematic analysis of children’s picture books in a Danish context by Stinne Glasdam, Ragnhild Julante Andersen Gulestø, Christie Stilwell

“…In total, 22 met the inclusion criteria. Data were extracted and analysed using a descriptive and reflexive thematic analysis, methodologically inspired by Braun and Clarke and theoretically informed by Goffman.ResultsThe empirical material consisted of 439 pages containing text and/or illustrations depicting nursing homes and/or older adults living in them. …”
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iPRISM: Intelligent Predicting Response to Cancer Immunotherapy through Systematic Modeling by Yinchun Su, Siyuan Li, Qian Wang, Bingyue Pan, Jiyin Lai, Guangyou Wang, Junwei Han, Qingfei Kong

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Next-Generation Potentiometric Sensors: A Review of Flexible and Wearable Technologies by Mahmoud Abdelwahab Fathy, Philippe Bühlmann

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LLM based expert AI agent for mission operation management by Sobhana Mummaneni, Syama Sameera Gudipati, Satwik Panda

“…The proposed LLM based AI assistant will perform tasks such as data analysis for pattern recognition, operational planning, and document summarization. …”
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Applying bioinformatic analysis for prognostic assessment of the <i>HS3ST6</i> missense mutations clinical significance in the development of hereditary angioedema by N. A. Pechnikova, Yu. V. Ostankova, M. A. Saitgalina, A. M. Bebyakov, A. R. Denisova, N. S. Podchernyaeva, A. A. Totolian

“…Application of bioinformatic analysis allowed us to obtain new data on four missense mutations in the studied gene. …”
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Study on Dynamic Changes of Dew Point Air Temperature at the Attachment Layer of Radiant Ceiling by Jin Wufeng, Bi Chen, Gao Pan, Jia Lizhi, Wang Zhiqiang

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