A Comparative Analysis of Swarm Intelligence Techniques for Feature Selection in Cancer Classification by Chellamuthu Gunavathi, Kandasamy Premalatha

“…Feature selection in cancer classification is a central area of research in the field of bioinformatics and used to select the informative genes from thousands of genes of the microarray. …”
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Possible cross‑talk between atrial fibrillation and obstructive sleep apnea revealed by transcriptomic analysis by Xinmiao Chen, Yi Li, Yao Liu

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An efficient leukemia prediction method using machine learning and deep learning with selected features. by Mahwish Ilyas, Muhammad Ramzan, Mohamed Deriche, Khalid Mahmood, Anam Naz

“…The suggested work predicts and classifies leukemia subtypes in gene data CuMiDa (GSE9476) using feature selection and ML techniques. The Curated Microarray Database (CuMiDa) collected 64 samples representing five classes of leukemia genes out of 22283 genes. …”
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Drug and cell type-specific regulation of genes with different classes of estrogen receptor beta-selective agonists. by Sreenivasan Paruthiyil, Aleksandra Cvoro, Xiaoyue Zhao, Zhijin Wu, Yunxia Sui, Richard E Staub, Scott Baggett, Candice B Herber, Chandi Griffin, Mary Tagliaferri, Heather A Harris, Isaac Cohen, Leonard F Bjeldanes, Terence P Speed, Fred Schaufele, Dale C Leitman

“…U2OS cells stably transfected with ERalpha or ERbeta were treated with E(2) or the ERbeta-selective compounds for 6 h. Microarray data demonstrated that ERB-041, MF101 and liquiritigenin were the most ERbeta-selective agonists compared to estradiol, followed by nyasol and then diarylpropionitrile. …”
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A Ratiometric Fluorescent Detection Platform Using G‐CDs@[Ru(bpy)3]2+ for the Specific Detection of Hypochlorite and Live Cell Imaging by Mingcong Rong, Zheng He, Danru Wang, Jiahao Zeng, Qian Liu, Li Niu

“…In this work, a sensing platform for rapid, sensitive, and specific ClO− detection is constructed using green fluorescent carbon dots (G‐CDs), with a linear detection range of 0.5–11 µm and a detection limit of 0.233 µm. …”
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Evaluation of the HumanMethylationEPIC v2.0 Bead Chip Using Low Quality and Quantity DNA Samples by Brando Poggiali, Mikkel Eriksen Dupont, Marie-Louise Kampmann, Athina Vidaki, Vania Pereira, Claus Børsting, Jacob Tfelt-Hansen, Jeppe Dyrberg Andersen

“…Abstract Background The HumanMethylationEPIC v2.0 BeadChip (EPIC v2.0) microarray is a widely used tool for genome-wide DNA methylation (DNAm) analysis, designed for high-quality human DNA with a recommended input of 250 ng. …”
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Protein detection enhanced by 3DNA dendrimer signal amplification by Johanna R. Mora, Tamara L. Zielinski, Bryce P. Nelson, Robert C. Getts

“…DNA dendrimers, conjugated with both anti-biotin antibodies and up to 350 labeling entities, were designed and adapted to protein microarray and enzyme-linked immunosorbent assay (ELISA) to improve the limits of protein detection with no additional steps or equipment. …”
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Case Report: Optical genome mapping enables identification of complex balanced chromosomal rearrangements by Xiaohang Hu, Jing Guo, Haiyang Sang, Jinyan Yan, Hong Chang, Ting Liu, Haixin Dong, Min Kong, Yanjun Tian, Liqing Jiang

“…Peripheral blood samples were collected for high-resolution karyotyping, chromosomal microarray analysis, and optical genome mapping. The high-resolution karyotype analysis identified complex chromosomal abnormalities. …”
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Optical genome mapping for detection of chromosomal aberrations in prenatal diagnosis by Qinxin Zhang, Yan Wang, Yiyun Xu, Ran Zhou, Mingtao Huang, Fengchang Qiao, Lulu Meng, An Liu, Jing Zhou, Li Li, Xiuqing Ji, Zhengfeng Xu, Ping Hu

“…Material and methods We retrospectively performed optical genome mapping analysis of amniotic fluid samples from 34 fetuses with various clinical indications and chromosomal aberrations detected through standard‐of‐care technologies, including karyotyping, fluorescence in situ hybridization, and/or chromosomal microarray analysis. …”
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Genomic imbalances detected through array CGH in fetuses with holoprosencephaly by Isabela Nelly Machado, Juliana Karina Heinrich, Ricardo Barini

“…All potential cytogenetic alterations detected on the arrays were matched against the known copy number variations databases. …”
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Mapping quantitative trait loci regions associated with Marek’s disease on chicken autosomes by means of selective DNA pooling by Ehud Lipkin, Jacqueline Smith, Morris Soller, David W. Burt, Janet E. Fulton

“…Allele substitution effects were calculated based on both pooled SNP microarray genotypes, and individual genotypes of QTLRs markers. …”
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A Novel Feature Selection Method for Classification of Medical Data Using Filters, Wrappers, and Embedded Approaches by Saba Bashir, Irfan Ullah Khattak, Aihab Khan, Farhan Hassan Khan, Abdullah Gani, Muhammad Shiraz

“…Microarray datasets are comprised of high-quality features and very few samples of data. …”
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Enhanced leukemia prediction using hybrid ant colony and ant lion optimization for gene selection and classification by Santhakumar D, Gnanajeyaraman Rajaram, Elankavi R, Viswanath J, Govindharaj I, Raja J

“…Gene selection plays a crucial role in the pre-processing of microarray data, aiming to identify a small set of genes that enhances classification accuracy and reduces costs. …”
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Genetic Comparison and Selection of Reproductive and Growth-Related Traits in Qinchuan Cattle and Two Belgian Cattle Breeds by Xiaopeng Li, Peng Niu, Xueyan Wang, Fei Huang, Jieru Wang, Huimin Qu, Chunmei Han, Qinghua Gao

“…These findings provide valuable molecular markers for enhancing reproductive efficiency, growth, and meat production through genetic selection and selective breeding strategies.…”
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Novel Detection and Clinical Utility of Serum-Derived Extracellular Vesicle in Angiosarcoma by Kazunori Yokoi, Jing Wang, Yusuke Yoshioka, Yasuhiro Fujisawa, Manabu Fujimoto, Takahiro Ochiya, Atsushi Tanemura

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Prenatally and postnatally sequential genetic etiology detection in corpus callosum abnormalities by Huili Xue, Aili Yu, Lin Zheng, Xianglan Ye, Lin Zhang, Qun Guo, Lingji Chen, Qingmei Shen, Na lin, Hailong Huang, Liangpu Xu

“…Abstract To evaluate the clinical utility of genetic testing via karyotyping, chromosomal microarray analysis (CMA), and exome sequencing in cases with corpus callosum abnormalities (CCA). …”
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Prenatal diagnosis and molecular cytogenetic characterization of 12 cases of chromosome 8 inverted duplication deletion syndrome by Xi Yang, Rong Hu, Weiwei Huang, Jian Lu

“…Additionally, CMA enables precise detection of copy number variations (CNVs), including exact size and genomic location. …”
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Nanomaterials based biosensors applied for detection of aflatoxin B1 in cereals: a review by Loyce Namanya, Emma Panzi Mukhokosi, Ediriisa Mugampoza

“…However, more studies are needed to address the automatic simultaneous detection of various aflatoxins in real samples and a biosensing system that integrates with microarray technology.…”
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Quantitative assessment of factors affecting the sensitivity of a competitive immunomicroarray for pesticide detection by Erik Belleville, Martin Dufva, Jens Aamand, Leif Bruun, Claus B.V. Christensen

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Detection of host-derived sphingosine by Pseudomonas aeruginosa is important for survival in the murine lung. by Annette E LaBauve, Matthew J Wargo

“…The members of the SphR transcriptome were identified by microarray analyses, and DNA binding assays showed specific interaction of these promoters with SphR, which enabled us to determine the consensus SphR binding site. …”
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