Prenatal diagnosis and genetic assessment of fetuses with single umbilical artery using chromosomal microarray analysis: a seven-year single-center retrospective study by Jianlong Zhuang, Nan Huang, Yu’e Chen, Jialing Wu, Xiaofang Ye, Chunnuan Chen

“…Amniocentesis was carried out in all affected cases, with samples analyzed via conventional karyotyping and chromosomal microarray analysis (CMA) to detect any chromosomal abnormalities. …”
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Evaluating methods for identifying and quantifying Streptococcus pneumoniae co-colonization using next-generation sequencing data by Jada Hackman, Martin L. Hibberd, Todd D. Swarthout, Jason Hinds, James Ashall, Carmen Sheppard, Gerry Tonkin-Hill, Kate Gould, Comfort Brown, Jacquline Msefula, Andrew A. Mataya, Michiko Toizumi, Lay-Myint Yoshida, Neil French, Robert S. Heyderman, Stefan Flasche, Brenda Kwambana, Stéphane Hué

“…Across the 24 individuals, the microarray detected 77 non-unique serotypes, of which 42 occurred at high relative abundance (>10%) (per individual, median, 3; range, 1–6 serotypes). …”
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Evaluation of Genomic Variants in Non-syndromic Congenital Heart Disease in Turkish Pediatric Group by Sinem Kocagil, Büşra Özkan, Sabri Aynacı, Tuğçem Akın, Ezgi Susam, Ebru Erzurumluoğlu Gökalp, Beyhan Durak Aras, Birsen Uçar, Sevilhan Artan, Oğuz Çilingir

“…Results: In microarray analysis, 9 novel copy-number variations (CNVs) that were not reported in population databases, and included OMIM genes were detected in 1.5% (6/40) of the patients. …”
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GPC3 as a potential diagnostic and prognostic marker for lung adenocarcinoma by Wei-qin Wu, Qing-song Sun, Li-li Gao, Ya-juan Jia, Hong-mei Zhao, Hong Sun, Xiang Han

“…Four gene expression profiles were downloaded from GEO and merged into a training cohort, and those genes that were differentially expressed between LUAD and normal samples were selected. We performed LASSO regression, SVM-RFE, and ROC curve analyses, and external validations were conducted using the GSE115002 dataset, TCGA + GTEx datasets, and tissue microarrays (TMAs) of 56 patients with LUAD from our hospital. …”
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Phenomenon of loss of heterozygosity in tumour tissue of breast cancer: association with expression of monoresistance genes by M. M. Tsyganov, I. V. Deryusheva, E. Yu. Garbukov, M. K. Ibragimova, P. V. Kazantseva, V. A. Bychkov, E. M. Slonimskaya, N. V. Litviakov

“…DNA was extracted from 68 biopsy specimens of tumour tissues using QIAamp DNA mini Kit (Qiagen, Germany). LOH status was detected using microarray analysis using high density DNA-chip manufactured by Affymetrix CytoScanTM HD Array company.Results. …”
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A novel multiple marker microarray analyzer and methodology to predict major obstetric syndromes using surface markers of circulating extracellular vesicles from maternal plasma by Malene Møller Jørgensen, Rikke Bæk, Jenni K. Sloth, Rami Sammour, Adi Sharabi‐Nov, Manu Vatish, Hamutal Meiri, Marei Sammar

“…Plasma samples were tested using a multiple microarray analyzer. Glass slides with 17 antibodies against EV surface receptors ‐ were incubated with raw plasma samples, detected by biotinylated secondary antibodies specific to EVs or placental EVs (PEVs), and labeled with cyanine 5–streptavidin. …”
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QCanvas: An Advanced Tool for Data Clustering and Visualization of Genomics Data by Nayoung Kim, Herin Park, Ningning He, Hyeon Young Lee, Sukjoon Yoon

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PET Foils Functionalized with Reactive Copolymers as Adaptable Microvolume ELISA Spot Array Platforms for Multiplex Serological Analysis of SARS-CoV-2 Infections by Sylwia Pniewska, Marcin Drozd, Alessandro Mussida, Dario Brambilla, Marcella Chiari, Waldemar Rastawicki, Elżbieta Malinowska

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The Comparison of Three Measures in Feature Selection by SONG Zhi-chao, KANG Jian, SUN Guang-lu, HE Yong-jun

“…Three representative linear or nonlinear measures，linear correlation coefficient，symmetrical uncertainty，and mutual information are selected. By combining them with the fast correlation-based filter ( FCBF) feature selection method，we make the comparison of selected feature subset from 8 gene microarray and image datasets. …”
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Tissue‐based quantitative proteomics to screen and identify the potential biomarkers for early recurrence/metastasis of esophageal squamous cell carcinoma by Xu‐Wei Cai, Wei‐Wei Yu, Wen Yu, Qin Zhang, Wen Feng, Mi‐Na Liu, Meng‐Hong Sun, Jia‐Qing Xiang, Ya‐Wei Zhang, Xiao‐Long Fu

“…Thirteen proteins were selected by cutoff value of 0.67 fold for underexpression and 1.5‐fold for overexpression. …”
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A cross-sectional pilot study to estimate the frequency of minor blood group alleles and phenotypes in RhD-negative North Indian blood donors by DNA microarray analysis by Gita Negi, Sheetal Malhotra, Bela Goyal, Praveen Kumar Singh, Anissa Atif Mirza

“…Hence, we planned to estimate frequencies of blood group alleles/phenotypes using DNA microarray analysis in the north Indian RhD-negative blood donor population. …”
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Exome sequencing and prenatal skeletal abnormalities: comprehensive review and meta-analysis and way forward by Mengting Jiang, Mengting Jiang, Bin Zhang, Jing Wang, Cui Wei, Xiuzhen Mao, Bin Yu

“…ObjectiveTo assess the detection rate of exome sequencing (ES) in fetuses diagnosed as skeletal abnormalities (SKA) with normal karyotype or chromosomal microarray analysis (CMA) results.MethodsWe conducted electronic searches in four databases, focusing on studies involving ES in fetuses with SKA. …”
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The Genetics of 241 Fetuses With Talipes Equinovarus: A 8‐Year Monocentric Retrospective Study by Pingshan Pan, Dongbing Huang, Jiangxuan Wei, Wei He, Peng Huang, Sheng Yi, Jing Huang, Dahua Meng, Shuyin Tan, Xinyan Li, Hongwei Wei, Linlin Wang

“…ABSTRACT Objective This study aims to investigate the utility of chromosomal microarray analysis (CMA) and whole exome sequencing (WES) in fetuses diagnosed with talipes equinovarus (TE), as well as to explore the genetic factors contributing to TE. …”
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Unveiling a rare genetic aberration: A case study of Prader-Willi syndrome (PWS) with atypical 15q11.2-q13.3 deletion by Senthilraja Ramalingam, Srividya Ganapathy, Jayaswathi Kanchepalli, Vani Jayaraj, Mani Mariyappa

“…The present case report describes the chromosomal anomalies suspected to be present in a neonate, detected using Chromosomal Microarray analysis, an advanced platform for genetic analysis. …”
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Expanding the clinical spectrum of 19p13.3 microduplication syndrome: a case report highlighting nephrotic syndrome and literature review by Wenjie Sun, Hong Yan, Mengxin Sun, Jie Wang, Kunxia Li

“…A series of treatments, chromosomal microarray analysis (CMA) and whole exome sequencing (WES) were performed. …”
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A Novel EP300 Variant in an African American Girl With Global Developmental Delay and Leukemia by Subit Barua, Vundavalli V. Murty, Alejandro Iglesias, Jun Liao

“…Method We performed karyotype, FISH, chromosomal microarray, and exome sequencing with probands bone marrow, blood, and buccal swab. …”
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Differential gene expression analysis in patients with primary hyperhidrosis by Ting Pu, Muhammad Ameen Jamal, Muhammad Nauman Tahir, Salman Ullah, Maher Un Nisa Awan, Asif Shahzad, Faisal Mahmood

“…Based on the highest expression of ITPR2 in hyperhidrosis, it was selected for PCR amplification as well as sequencing. …”
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Vision and development in Trichoderma atroviride by Casas S, Cortes C, Rios M, Rosales T, Bibbins M, Olmedo V, Herrera-Estrella A

“…This unigene set was printed in microarrays and used to search for light induced genes. …”
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Role of transcriptomics in the study of oral cancer by Prabhu Manickam Natarajan, Vidhya Rekha Umapathy

“…We delve into RNA sequencing (RNA-seq), single-cell RNA sequencing (scRNA-seq), long non-coding RNA sequencing (lncRNA-seq), microarray analysis, and small RNA profiling, showcasing their unique contributions to unraveling the complexities of oral cancer. …”
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MTAP deficiency is highly homogeneous in advanced, muscle-invasive urothelial carcinoma of the urinary bladder by Natalia Gorbokon, Katharina Teljuk, Viktor Reiswich, Florian Lutz, Sebastian Dwertmann Rico, Clara Lühr, Christian Bernreuther, Yaryna Klos Al Bunni, Cosima Völkel, Henning Plage, Maximilian Lennartz, Margit Fisch, Sarah Minner, Ronald Simon, Guido Sauter, Henrik Zecha, Stefan Steurer, Thorsten Schlomm, Tatjana Vlajnic, Lukas Bubendorf, Michael Rink, Martina Kluth, Florian Viehweger, Morton Freytag

“…MTAP IHC is a near perfect surrogate for the detection of homozygous 9p21 (MTAP) deletions. Drugs targeting MTAP deficiency could be highly useful in a relevant subset of invasive urothelial bladder cancers.…”
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