Review of applications of deep learning in veterinary diagnostics and animal health by Sam Xiao, Navneet K. Dhand, Zhiyong Wang, Kun Hu, Kun Hu, Peter C. Thomson, John K. House, Mehar S. Khatkar, Mehar S. Khatkar

“…Deep learning (DL), a subfield of artificial intelligence (AI), involves the development of algorithms and models that simulate the problem-solving capabilities of the human mind. …”
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Research trends among new investigators at ISOQOL: a bibliometric analysis from 2019 to 2023 by Jae-Yung Kwon, Manraj N. Kaur, Ellen B. M. Elsman, Ava Mehdipour, Lori Suet Hang Lo, Ahmed M. Y. Osman, Sandrine Herbelet, Carrie-Anne Ng, Lotte van der Weijst, on behalf of the New Investigators Special Interest Group Members

“…Methodology Data on publications authored by 56 NI-SIG members between 2019 and 2023 were extracted from Web of Science and Scopus. A two-step screening process, guided by the Wilson and Cleary model of QoL, identified 561 unique documents for analysis. …”
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ATP6V0A4 as a novel prognostic biomarker and potential therapeutic target in oral squamous cell carcinoma by Xiaopu Gao, Jiamin Zhou, Yu Qiao, Chuyin Lin, Guanxiong Zhang, Qiuyu Wu, Zhikang Su, Qianji Zhang, Songkai Huang

“…Methods This study initially integrated TCGA and GEO databases for cross-platform differential gene screening. A prognostic model was constructed using univariate Cox regression and LASSO regression, complemented by random forest algorithms to identify core genes. …”
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A Combined Deep CNN: LSTM with a Random Forest Approach for Breast Cancer Diagnosis by Almas Begum, V. Dhilip Kumar, Junaid Asghar, D. Hemalatha, G. Arulkumaran

“…Computer-aided diagnosis (CAD) has minimum intervention of humans and produces more accurate results than humans. It will be a difficult and long task that depends on the expertise of pathologists. …”
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A Two-Stage Penalized Logistic Regression Approach to Case-Control Genome-Wide Association Studies by Jingyuan Zhao, Zehua Chen

“…This approach consists of a screening stage and a selection stage. In the screening stage, main-effect and interaction-effect features are screened by using L1-penalized logistic like-lihoods. …”
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Iterative phase contrast CT reconstruction with novel tomographic operator and data-driven prior. by Stefano van Gogh, Subhadip Mukherjee, Jinqiu Xu, Zhentian Wang, Michał Rawlik, Zsuzsanna Varga, Rima Alaifari, Carola-Bibiane Schönlieb, Marco Stampanoni

“…Moreover, the highly ill-conditioned differential nature of the GI-CT forward operator renders the inversion from corrupted data even more cumbersome. In this paper, we propose a novel regularized iterative reconstruction algorithm with an improved tomographic operator and a powerful data-driven regularizer to tackle this challenging inverse problem. …”
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Integrating status-neutral and targeted HIV testing in Zimbabwe: A complementary strategy. by Hamufare D Mugauri, Owen Mugurungi, Joconiah Chirenda, Kudakwashe Takarinda, Prosper Mangwiro, Mufuta Tshimanga

“…First tests were 65% more likely to test HIV positive (a95%CI: 1.43, 1.91) whilst screened patients were 3.89 times more likely to link to HIV prevention services (a95%CI: 3.05, 4.97), against 25.5% (n = 1,871) linkage among patients not screened.…”
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High-performance computing for static security assessment of large power systems by Venkateswara Rao Kagita, Sanjaya Kumar Panda, Ram Krishan, P. Deepak Reddy, Jabba Aswanth

“…We perform extensive experiments to evaluate the efficacy of the proposed algorithm. As a result, we establish that the proposed parallel algorithm with high-performance computing (HPC) computing is much faster than the traditional algorithms. …”
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Evaluation of three commercial rapid immunoassays for the diagnosis of Clostridioides difficile infection by Hannes Bjarki Vigfússon, Theresa Ennefors, Torbjörn Norén, Martin Sundqvist

“…The C. diff Quik Chek Complete performed the best of the three immunoassays, and when used in combination with NAAT, is a viable option for the laboratory diagnosis of CDI.IMPORTANCELaboratory diagnosis of Clostridioides difficile infection is complex, and current guidelines recommend a two-step diagnostic algorithm with a sensitive screening test and a more specific confirmatory test. …”
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Identifying Data-Driven Clinical Subgroups for Cervical Cancer Prevention With Machine Learning: Population-Based, External, and Diagnostic Validation Study by Zhen Lu, Binhua Dong, Hongning Cai, Tian Tian, Junfeng Wang, Leiwen Fu, Bingyi Wang, Weijie Zhang, Shaomei Lin, Xunyuan Tuo, Juntao Wang, Tianjie Yang, Xinxin Huang, Zheng Zheng, Huifeng Xue, Shuxia Xu, Siyang Liu, Pengming Sun, Huachun Zou

“…We trained a supervised machine learning model and developed pathways to classify individuals before evaluating its diagnostic validity and usability on an external cohort. …”
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Bioinformatics analysis of ferroptosis-related biomarkers and potential drug predictions in doxorubicin-induced cardiotoxicity by Jian Yu, Jian Yu, Jiangtao Wang, Xinya Liu, Xinya Liu, Cancan Wang, Cancan Wang, Li Wu, Yuanming Zhang, Yuanming Zhang

“…Utilized LASSO regression, SVM-RFE, and RF algorithms to identify key genes, followed by validation using external datasets (GSE232331, GSE230638) and ROC curve plotting to determine the diagnostic value of key genes. …”
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Optimized Landing Site Selection at the Lunar South Pole: A Convolutional Neural Network Approach by Yongjiu Feng, Haoteng Li, Xiaohua Tong, Pengshuo Li, Rong Wang, Shurui Chen, Mengrong Xi, Jingbo Sun, Yuhao Wang, Huaiyu He, Chao Wang, Xiong Xu, Huan Xie, Yanmin Jin, Sicong Liu

“…The combined use of CNN and SHAP enables more effective potential site screening and a deeper understanding of the factors influencing selection. …”
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Bioinformatic analysis, clinical implications and experimental validation of ferroptosis-related feature gene in IgA nephropathy: focus on DUSP1 by Tingting Liu, Tingting Pan, Mingxin Chang, Shaojie Fu, Hongzhao Xu, Hao Wu, Zhonggao Xu, Yanli Cheng

“…Among them, dual specificity phosphatase 1 (DUSP1) was screened as FFG by three machine learning algorithms. …”
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Identifying neural substrates of competitive interactions and sequence transitions during mechanosensory responses in Drosophila. by Jean-Baptiste Masson, François Laurent, Albert Cardona, Chloé Barré, Nicolas Skatchkovsky, Marta Zlatic, Tihana Jovanic

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Machine learning approach effectively discriminates between Parkinson’s disease and progressive supranuclear palsy: Multi-level indices of rs-fMRI by Weiling Cheng, Xiao Liang, Wei Zeng, Jiali Guo, Zhibiao Yin, Jiankun Dai, Daojun Hong, Fuqing Zhou, Fangjun Li, Xin Fang

“…Various rs-fMRI indices were extracted, followed by a comprehensive feature screening for each index. We constructed fifteen distinct combinations of indices and selected four machine learning algorithms for model development. …”
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PRKDC regulates cGAMP to enhance immune response in lung cancer treatment by Zhanghao Huang, Zhanghao Huang, Zhanghao Huang, Runqi Huang, Runqi Huang, Runqi Huang, Jun Zhu, Jun Zhu, Youlang Zhou, Youlang Zhou, Jiahai Shi, Jiahai Shi

“…This study aimed to investigate the antitumor effects of 2’,3’-cGAMP in LUAD.MethodHerein, patients with LUAD were screened for prognostic biomarkers, which were then assessed for sensitivity to immunotherapy and chemotherapy utilizing the “TIDE” algorithm and CellMiner database. …”
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Molecular epidemiology of enteroviruses from Guatemalan wastewater isolated from human lung fibroblasts. by Leanna Sayyad, Chelsea Harrington, Christina J Castro, Hanen Belgasmi-Allen, Stacey Jeffries Miles, Jamaica Hill, María Linda Mendoza Prillwitz, Lorena Gobern, Ericka Gaitán, Andrea Paola Delgado, Leticia Castillo Signor, Marc Rondy, Gloria Rey-Benito, Nancy Gerloff

“…Murine recombinant fibroblast L-cells (L20B) and human rhabdomyosarcoma (RD) cells are used for the isolation of polioviruses following a standard detection algorithm. Though non-polio-Enteroviruses (NPEV) can be isolated, the algorithm is optimized for the detection of polioviruses. …”
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Supporting self-management with an internet intervention for low back pain in primary care: a RCT (SupportBack 2) by Adam W A Geraghty, Taeko Becque, Lisa C Roberts, Jonathan Hill, Nadine E Foster, Lucy Yardley, Beth Stuart, David A Turner, Gareth Griffiths, Frances Webley, Lorraine Durcan, Alannah Morgan, Stephanie Hughes, Sarah Bathers, Stephanie Butler-Walley, Simon Wathall, Gemma Mansell, Malcolm White, Firoza Davies, Paul Little

“…We also wanted to know whether adding phone calls from a physiotherapist made the website more effective. Finally, we explored whether these options would represent ‘good value for money’ for the National Health Service. …”
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Association between the development of sepsis and the triglyceride-glucose index in acute pancreatitis patients: a retrospective investigation utilizing the MIMIC-IV database by Lin Xu, Xuejing Li, Na Zhang, Chunmei Guo, Pan Wang, Min Gao, Yanhui Zhang, Lixin Zhao

“…Utilizing the formula ln[(triglycerides mg/dl) × (glucose mg/dl)/2], the TyG index was calculated. The Boruta algorithm and Xgboost model were used for feature selection in order to pinpoint the important variables affecting results. …”
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Single-cell profiling of SLC family transporters: uncovering the role of SLC7A1 in osteosarcoma by Yan Liao, Junkai Chen, Hao Yao, Ting Zheng, Jian Tu, Weidong Chen, ZeHao Guo, Yutong Zou, Lili Wen, Xianbiao Xie

“…Multiple analytical algorithms indicated that SLCs were associated with immune cell infiltration and immune checkpoint gene expression. …”
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