Acoustic Representation of Prosodic Cues during the Production of Persian Irony and Sarcasm in Spontaneous Discourse by Raha Koochacki, Mohammad Hossein Sharafzadeh, Ameneh Zare

“…Thereupon any pragmatic strategies (irony subtypes), the observed lexical-syntactic cues accompanied by the prosodic features of the target utterances coded considering TOBI system and using Praat software, were annotated manually in different ELAN tiers. …”
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Refactoring Alma: Simplifying Circulation Settings in the Alma Integrated Library System (ILS) by Wilhelmina Randtke

“…Refactoring is the process of restructuring existing code, in order to make the code easier to maintain, without changing the behavior of the software. …”
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Improving Token-Based Object Detection With Video by Abhineet Singh, Nilanjan Ray

“…We also compare it with several video detectors on UA-DETRAC to show that it is competitive with the current state of the art even with the computational bottleneck. We make our code and models publicly available.…”
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Differential DNA Methylation of MicroRNA Genes in Temporal Cortex from Alzheimer’s Disease Individuals by Darine Villela, Rodrigo F. Ramalho, Aderbal R. T. Silva, Helena Brentani, Claudia K. Suemoto, Carlos Augusto Pasqualucci, Lea T. Grinberg, Ana C. V. Krepischi, Carla Rosenberg

“…This miRNA set is predicted to target 33 coding genes from the neuregulin receptor complex (ErbB) signaling pathway, which is required for the neurons myelination process. …”
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FingerDTA: A Fingerprint-Embedding Framework for Drug-Target Binding Affinity Prediction by Xuekai Zhu, Juan Liu, Jian Zhang, Zhihui Yang, Feng Yang, Xiaolei Zhang

“…Ultimately, the docking experiment demonstrates that FingerDTA can find novel drug candidates for targets. All codes are available at http://lanproxy.biodwhu.cn:9099/mszjaas/FingerDTA.git.…”
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Robust prediction of chlorophyll-A from nitrogen and phosphorus content in Philippine and global lakes using fine-tuned, explainable machine learning by Karl Ezra Pilario, Eric Jan Escober, Aurelio de los Reyes V, Maria Pythias Espino

“…Hence, these parameters are suggested to be monitored more closely for detecting algal blooms. By making our codes accessible, we hope that our methods can serve as a benchmark for the data-driven modeling of Chl-a content in lakes, and aid in their management through model deployment.…”
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MicroRNA-200b suppresses the invasion and migration of hepatocellular carcinoma by downregulating RhoA and circRNA_000839 by Ben-gang Wang, Jun-shuai Li, Yong-feng Liu, Qian Xu

“…MicroRNAs could mediate the targeted coding gene and the targeted non-coding RNA to form endogenous competition, which have an important regulatory role in tumorigenesis of many types of cancer, including hepatocellular carcinoma. …”
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GPCR-A17 MAAP: mapping modulators, agonists, and antagonists to predict the next bioactive target by Ana B. Caniceiro, Ana M. B. Amorim, Nícia Rosário-Ferreira, Irina S. Moreira

“…By guiding experimental validation, GPCR-A17 MAAP accelerates drug discovery for various therapeutic targets. The code and data are available on GitHub ( https://github.com/MoreiraLAB/GPCR-A17-MAAP ). …”
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Temporal and spatial self supervised learning methods for electrocardiograms by Wenping Chen, Huibin Wang, Lili Zhang, Min Zhang

“…This highlights TSSL’s ability to provide deeper insights and enhanced feature extraction beyond mere performance improvements. We make our code publicly available on https://github.com/cwp9731/temporal-spatial-self-supervised-learning.…”
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SeisAug: A data augmentation python toolkit by D. Pragnath, G. Srijayanthi, Santosh Kumar, Sumer Chopra

“…Furthermore, by making all codes available on GitHub, the toolkit facilitates the easy application of DA techniques, empowering end-users to enhance their seismological waveform datasets effectively and overcome the initial drawbacks posed by the scarcity of labelled data.…”
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Sustainable nutrition from edible chrysanthemums: evaluating genotypes for nutritional, antioxidant, and consumer preference attributes by Hoora Bayanifar, Davood Hashemabadi, Mohammad Sadegh Allahyari

“…Utilizing multi-attribute decision-making methods, Codes 110 and 603 were ranked first and second, respectively. …”
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Community-based reconstruction and simulation of a full-scale model of the rat hippocampus CA1 region. by Armando Romani, Alberto Antonietti, Davide Bella, Julian Budd, Elisabetta Giacalone, Kerem Kurban, Sára Sáray, Marwan Abdellah, Alexis Arnaudon, Elvis Boci, Cristina Colangelo, Jean-Denis Courcol, Thomas Delemontex, András Ecker, Joanne Falck, Cyrille Favreau, Michael Gevaert, Juan B Hernando, Joni Herttuainen, Genrich Ivaska, Lida Kanari, Anna-Kristin Kaufmann, James Gonzalo King, Pramod Kumbhar, Sigrun Lange, Huanxiang Lu, Carmen Alina Lupascu, Rosanna Migliore, Fabien Petitjean, Judit Planas, Pranav Rai, Srikanth Ramaswamy, Michael W Reimann, Juan Luis Riquelme, Nadir Román Guerrero, Ying Shi, Vishal Sood, Mohameth François Sy, Werner Van Geit, Liesbeth Vanherpe, Tamás F Freund, Audrey Mercer, Eilif Muller, Felix Schürmann, Alex M Thomson, Michele Migliore, Szabolcs Káli, Henry Markram

“…Among several applications in the article, we focus on theta rhythm, a prominent hippocampal oscillation associated with various behavioral correlates and use our computer model to reproduce experimental findings. Finally, we make data, code, and model available through the hippocampushub.eu portal, which also provides an extensive set of analyses of the model and a user-friendly interface to facilitate adoption and usage. …”
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Dysregulation of microRNA (miRNA) Due to Phthalate/Phthalate Metabolite Exposure and Associated Health Effects: A Narrative Review by Aamer Mohammed, Stephen L. Atkin, Edwina Brennan

“…As miRNAs mostly target protein-coding transcripts, they are involved in nearly all networks that regulate developmental and pathological processes. …”
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A protocol for microRNA extraction from gastrointestinal digesta by Miguel Cifuentes Acebal, Yvan Devaux, Torsten Bohn

“…MicroRNAs (miRNAs) are non-coding RNAs that influence gene-expression via post-transcriptional regulation of target protein-coding RNAs. With literature reports indicating survival of diet-derived miRNAs following their ingestion, it is important to study their stability and concentration during gastrointestinal digestion. …”
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Innføring av studentaktive læringsmetoder for å utvide studentenes forståelse av programmering by T. F. Brustad

“…In teaching programming subjects, it can sometimes be difficult to get students to plan and reflect on the choices they make when coding, and they often end up choosing the first solution they find. …”
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Effective inhibition of dengue virus replication using 3′UTR-targeted Vivo-Morpholinos by Mengwei Niu, Wenyanbo Yi, Zhuofan Dong, Xiaofeng Li, Xue Dong, Lifang Yu, Yao Han, Oujia Zhang, Ziyang Sheng, Jing An, Hao Li, Yansong Sun

“…Nucleic acid drugs, particularly Vivo-Morpholinos (MOs), have emerged as a promising avenue for antiviral treatment due to their programmability and precise targeting, as well as their safety and stability.MethodIn this study, we designed and developed 10 morpho-modified (octa-guanidine dendrimer) vivo-MO molecules that target each coding gene of DENV. Subsequently, we assessed the inhibitory impact of vivo-MOs on dengue viral RNA load utilizing qRT-PCR. …”
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Nystromformer based cross-modality transformer for visible-infrared person re-identification by Ranjit Kumar Mishra, Arijit Mondal, Jimson Mathew

“…Additionally, NiCTRAM outperforms existing methods on RegDB and LLCM, achieving up to 5.90% higher Rank-1 accuracy and 5.83% higher mAP in Thermal-to-Visible mode. We will make the code and the model available at https://github.com/Ranjitkm2007/NiCTRAM…”
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UAV-Assisted Unbiased Hierarchical Federated Learning: Performance and Convergence Analysis by Ruslan Zhagypar, Nour Kouzayha, Hesham ElSawy, Hayssam Dahrouj, Tareq Y. Al-Naffouri

“…The simulation results underscore the effectiveness of the proposed unbiased HFL scheme, demonstrating a 5.5% higher accuracy and approximately 85% faster convergence compared to conventional HFL algorithms. We make our code available at the following GitHub repository: <inline-formula> <tex-math notation="LaTeX">$\texttt {UAV-assisted Unbiased HFL Code}$ </tex-math></inline-formula>.…”
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A quantitative PCR to detect non-toxigenic Clostridioides difficile by Khurshida Begum, Hubert C. Chua, M. Jahangir Alam, Kevin W. Garey, Jinhee Jo

“…To better guide clinical decisions and enhance the understanding of NTCD epidemiology, molecular assays that specifically target non-coding regions unique to NTCD strains are needed. …”
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Early Vascular Developmental Toxicity and Underlying Mechanisms of 1-Bromo-3,6-dichlorocarbazole (1-B-36-CCZ) in Zebrafish Larvae by Jie Gu, Ziyu Gong, Yue Fan, Jun Hu, Liguo Guo, Wenming Pei, Daqiang Yin

“…Enrichment analysis of target protein-coding genes and verapamil replication experiments indicated that 1-B-36-CCZ may cause damage to early vascular development in zebrafish larvae by altering intracellular calcium ion content through the activation of the SRC-mediated calcium ion signaling pathway. …”
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