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Accelerating next generation sequencing data analysis: an evaluation of optimized best practices for Genome Analysis Toolkit algorithms
Published 2020-03-01“…To enhance the current understanding of software and hardware used to compute large scale human genomic datasets (NGS), the performance and accuracy of optimized versions of GATK algorithms, including Parabricks and Sentieon, were compared to the results of the original application (GATK V4.1.0, Intel x86 CPUs). Parabricks was able to process a 50× whole-genome sequencing library in under 3 h and Sentieon finished in under 8 h, whereas GATK v4.1.0 needed nearly 24 h. …”
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Research and Implementation of SVDU Simulator Based on Emulation Technology
Published 2021-01-01“…In order to meet the needs of nuclear power safety-level digital control system (DCS), like designing verification, operator training, and accidental drills, for the SVDU in the NASPIC platform developed independently by China National Nuclear Corporation, a virtual embedded system technology based on the micro x86 industrial host is proposed to make software simulation to the SVDU physical controller with exactly the same hardware appearance of the original one. …”
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