Epithelial and immune transcriptomic characteristics and possible regulatory mechanisms in asthma exacerbation: insights from integrated studies by Ye Liu, Yue Li, Ruhao Wu, Yu Wang, Pengfei Li, Tianci Jiang, Ke Wang, Yize Liu, Zhe Cheng

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Landscape of the Peripheral Immune Response Induced by Intraoperative Radiotherapy Combined with Surgery in Early Breast Cancer Patients by Danian Dai, Xuerui Li, Hongkai Zhuang, Yun Ling, Lezi Chen, Cheng Long, Jinhui Zhang, Yunjie Wang, Yuehua Li, Hailin Tang, Bo Chen

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New Lung Cancer Panel for High-Throughput Targeted Resequencing by Eun-Hye Kim, Sunghoon Lee, Jongsun Park, Kyusang Lee, Jong Bhak, Byung Chul Kim

Subjects: “…high-throughput nucleotide sequencing…”
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The Human Cell Atlas: Promises, recent developments, and bridging the African single-cell data gap by Enahoro S. Abhulimen

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k-error linear complexity of binary cyclotomic generators by Zhixiong CHEN, Chenhuang WU

Subjects: “…Legendre sequence…”
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IMAGE QUALITY ANALYSIS 4 CHAMBER SECTIONS OF CARDIAC MRI WITH AND WITHOUT UTILIZING SHIM VOLUME IN THE STEADY STATE FREE PRECESSION SEQUENCES by Clinton Johan Ade Wicaksono, Susy Suswaty, Nursama Heru Apriantoro, Ary Sasongko

“…Afterward, the 4 chamber sections in SSFP sequence were given different treatment, namely, with and without the use of shim volume. …”
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Steroid hormone receptors, exome sequencing and treatment responsiveness of breast cancer patient-derived xenografts originated in a South American country by Gabriela Pataccini, Andrés Elia, Gonzalo Sequeira, Luisa Ambrosio, Marcela Coianis, Caroline A. Lamb, Paola A. Rojas, Paula Martínez Vázquez, Javier Burruchaga, Eunice Spengler, Silvia I. Vanzulli, Martin Abba, Claudia Lanari

“…Other fragments were fixed in formalin for diagnosis and immunohistochemistry, and a third piece was frozen at -80°C for molecular studies or whole exome-sequencing. Tumors were serially transplanted into NSG mice. …”
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Insights into microbial compositions of the respiratory tract of neonatal dairy calves in a longitudinal probiotic trial through 16S rRNA sequencing by Jia W. Tan, Susan D. Eicher, Janice E. Kritchevsky, Keith A. Bryan, Aaron Dickey, Carol G. Chitko-McKown, Tara G. McDaneld

“…DNA was exacted from the nostril and tonsil swabs and lung lavage fluids, and 16S ribosomal RNA gene hypervariable regions 1-3 were subsequently sequenced.ResultsTemporal variation in alpha bacterial diversity within the nostril, tonsil, and lung samples was observed, indicating distinct bacterial compositions among sampling time points. …”
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The genome sequence of the Pacific oyster, Magallana gigas (Thunberg, 1793) [version 2; peer review: 2 approved, 1 approved with reservations] by Rebekka Uhl, Rob Mrowicki

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High-coverage whole-genome sequencing of a Jakun individual from the “Orang Asli” Proto-Malay subtribe from Peninsular Malaysia by Wai-Sum Yap, Alvin Cengnata, Woei-Yuh Saw, Thuhairah Abdul Rahman, Yik-Ying Teo, Renee Lay-Hong Lim, Boon-Peng Hoh

“…In this study, we report the genome structure of a Jakun female, based on whole-genome sequencing, which yielded an average coverage of 35.97-fold. …”
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Whole Exome Sequencing Reveals Compound Heterozygosity for Ethnically Distinct PEX7 Mutations Responsible for Rhizomelic Chondrodysplasia Punctata, Type 1 by Jessie C. Jacobsen, Emma Glamuzina, Juliet Taylor, Brendan Swan, Shona Handisides, Callum Wilson, Michael Fietz, Tessa van Dijk, Bart Appelhof, Rosamund Hill, Rosemary Marks, Donald R. Love, Stephen P. Robertson, Russell G. Snell, Klaus Lehnert

“…The brother remains alive but severely disabled at 19 years of age. Whole exome sequencing identified compound heterozygous stop mutations in the peroxisome biogenesis factor 7 gene in both individuals. …”
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Genome constitution and differentiation of subgenomes in Siberian and Far Eastern endemic species of the genus Elymus (Poaceae) according to the sequencing of the nuclear gene waxy by A. V. Agafonov, S. V. Asbaganov, E. V. Shabanova (Kobozeva), I. V. Morozov, A. A. Bondar

“…Cluster phylogenetic analysis revealed differentiation in St and H subgenome sequences into two evolutionary variants: St1 vs. St2 and H1 vs. …”
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Effect of Stacking Sequence on Mechanical and Water Absorption Characteristics of Jute/Banana/Basalt Fabric Aluminium Fibre Laminates With Diamond Microexpanded Mesh by Padmanabhan Rengaiyah Govindarajan, Rajesh Shanmugavel, Karthikeyan Subramanian, Sivasubramanian Palanisamy, Carlo Santulli, Cristiano Fragassa

“…More specifically, it investigates the effect on the mechanical and water absorption properties of incorporating basalt (B), jute (J), banana (Bn) fibres, and Al-DMEM as reinforcing materials in a traditional epoxy resin. Several stacking sequences were compared and discussed. The basalt-banana-aluminium-banana-basalt (BBnABnB) (five layers) laminate exhibited remarkable compressive strength (25.7 MPa), interlaminar shear strength (25.2 MPa), Izod impact strength (2.98 J), tensile strength (42.8 MPa), and tensile modulus (3.1 GPa). …”
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From Traditional Typing to Genomic Precision: Whole-Genome Sequencing of <i>Listeria monocytogenes</i> Isolated from Refrigerated Foods in Chile by Julio Parra-Flores, Beatriz Daza-Prieto, Pamela Chavarria, Miriam Troncoso, Anna Stöger, Guillermo Figueroa, Jetsi Mancilla-Rojano, Ariadnna Cruz-Córdova, Aleksandra Martinovic, Werner Ruppitsch

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Molecular Identification of Necrophagous Muscidae and Sarcophagidae Fly Species Collected in Korea by Mitochondrial Cytochrome c Oxidase Subunit I Nucleotide Sequences by Yu-Hoon Kim, Sang Eon Shin, Chan Seon Ham, Seong Yoon Kim, Kwang Soo Ko, Tae-Ho Jo, Gi Hoon Son, Seong Hwan Park, Juck-Joon Hwang

“…After DNA extraction from collected flies, PCR amplification and automatic sequencing of the whole COI sequence were performed. …”
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Combining Individual‐Based Radio‐Tracking With Whole‐Genome Sequencing Data Reveals Candidate for Genetic Basis of Partial Migration in a Songbird by Matthias H. Weissensteiner, Kira Delmore, Valentina Peona, Juan Sebastian Lugo Ramos, Gregoire Arnaud, Julio Blas, Bruno Faivre, Ivan Pokrovsky, Martin Wikelski, Jesko Partecke, Miriam Liedvogel

“…We generated whole‐genome sequencing data for 60 individuals, each of which was phenotyped for migratory behavior using radio‐telemetry tracking. …”
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Single‐Nucleus RNA Sequencing Reveals That Gabra6+ Neurons in Prefrontal Cortex Promote the Progression of PTSD After Shockwave‐Induced TBI by Xiaowei Fei, Zehan Zhang, Ya‐nan Dou, Weihao Lv, Hongqing Chen, Li Wang, Xin He, Wangshu Chao, Peng Luo, Zhou Fei

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Assessment of the Diversity of Tomato (Solanum Lycopersicum L.) Accessions in the Nigeria National Gene Bank Using Simple Sequence Repeat (SSR) Markers by Olabisi Olajire, Olusola Oduoye, Zainab Jamaleddine, Olatunde Fajimi, David Coker, Abiodun Sunday, Opeyemi Oluwasanya, Best Anukwu, Abiodun Ogundele, Omowumi Ayekun, Yetunde Amos

“…This study aims to assess the genetic diversity of tomato accessions in the Nigeria gene bank using Simple Sequence Repeat (SSR) markers. DNA was extracted from fifty tomato accessions using the CTAB protocol. …”
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Integrated analysis of M2 macrophage-related gene prognostic model and single-cell sequence to predict immunotherapy response in lung adenocarcinoma by Meifang Li, Zhiping Wang, Bin Huang, Yanyun Lai, Meng Zhang, Cheng Lin

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Testing Phylogenetic Placement Accuracy of DNA Barcode Sequences on a Fish Backbone Tree: Implications of Backbone Tree Completeness and Species Representation by M. A. Thanuja M. Fernando, Jinzhong Fu, Sarah J. Adamowicz

“…ABSTRACT Advancements in DNA sequencing technology have facilitated the generation of a vast number of DNA sequences, posing opportunities and challenges for constructing large phylogenetic trees. …”
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