Comparing subsampling strategies for metagenomic analysis in microbial studies using amplicon sequence variants versus operational taxonomic units. by Daniel Segura, Divya Sharma, Osvaldo Espin-Garcia

“…Due to the high cost of shotgun metagenomic sequencing (SM-seq), microbiome analyses can be done cost-effectively in two phases: Phase 1-sequencing of 16S ribosomal RNA, and Phase 2-SM-seq of an informative subsample. …”
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The Occurrence of Sequences Identical with Epitopes from the Allergen Pen a 1.0102 Among Food and Non-Food Proteins by Minkiewicz Piotr, Sokolowska Jolanta, Darewicz Malgorzata

“…In the group of known tropomyosin epitopes, the fragment with the sequence ESKIVELEEEL was found in the sequence of channel catfish (Ictalurus punctatus) tropomyosin. …”
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Integration of single‐cell and bulk RNA sequencing unravels metalloendopeptidase+ neutrophils as key inflammatory drivers in abdominal aortic aneurysm by Lushun Yuan, Chuan Liang, Shuzhen Cheng, Jianliang Zhou, Song Chen

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Reduced Representation and Whole‐Genome Sequencing Approaches Highlight Beluga Whale Populations Associated to Eastern Canada Summer Aggregations by Luca Montana, Trevor T. Bringloe, Audrey Bourret, Caroline Sauvé, Arnaud Mosnier, Steven H. Ferguson, Lianne Postma, Véronique Lesage, Cortney A. Watt, Mike O. Hammill, Geneviève J. Parent

“…Here, we used reduced representation and whole‐genome sequencing approaches to characterize population structure of beluga whales in eastern Canada and examine admixture between populations. …”
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The genome sequence of the Montseny horsehair worm, Gordionus montsenyensis sp. nov., a key resource to investigate Ecdysozoa evolution by Eleftheriadi, Klara, Guiglielmoni, Nadège, Salces-Ortiz, Judit, Vargas-Chavez, Carlos, Martínez-Redondo, Gemma I., Gut, Marta, Flot, Jean-François, Schmidt-Rhaesa, Andreas, Fernández, Rosa

“…The circular mitochondrial genome was also assembled into a 15-kilobases sequence. Gene annotation predicted 10,320 protein-coding genes in the nuclear genome. …”
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Use of the Tei Index in the Conservative Management of TRAP Sequence Pregnancies Diagnosed during the Periviable Period: A Case Series by Kristina Martimucci, Theresa Kuhn, Robyn Bilinski, Jesus Alvarez-Perez

“…Twin Reverse Arterial Perfusion (TRAP) Sequence is a rare complication of monochorionic pregnancies. …”
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Validation of Fuscoporia (Hymenochaetales, Basidiomycota) ITS sequences and five new species based on multi-marker phylogenetic and morphological analyses by Yoonhee Cho, Dohye Kim, Yoongil Lee, Juhwan Jeong, Shahid Hussain, Young Woon Lim

“…They were validated and re-identified based on the research articles they were published in and, if unpublished, based on sequences from the type, type locality-derived sequences, or otherwise reliable sequences. …”
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Deciphering Gas Dynamics and Star Formation in a z = 1.1 Main-sequence Spiral Galaxy with ALMA and JWST by Zhaoran Liu, Tadayuki Kodama, Takahiro Morishita, Kianhong Lee, Fengwu Sun, Mariko Kubo, Zheng Cai, Yunjing Wu, Zihao Li

“…With a substantial molecular gas fraction ( f _mol = 0.44  ±  0.02), ASPECS-LP.3 mm.06 remains on the star-forming main sequence and adheres to the Kennicutt–Schmidt relation, indicating typical gas-to-star conversion efficiency. …”
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16S rRNA gene sequencing of non-lactic acid bacteria cultures from lait caillé in Burkina Faso by Geoffroy Romaric Bayili, Clarisse S. Compaoré, Bréhima Diawara, Lene Jespersen, Hagretou Sawadogo-Lingani

“…Pure colonies were selected, then the penta-GTG oligonucleotide (GTG)5-based rep-PCR fingerprinting followed by cluster analysis and sequencing of the 16S rRNA gene was performed to identify the isolates. …”
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Genetic variation of the nuclear sequences of mitochondrial origin associated with retrotransposon Tv1 insertions in Drosophila species of the virilis group by B. V. Andrianov, D. A. Romanov, T. V. Gorelova

“…Mitochondrial DNA sequences integrated into chromosomes are a promising object for designing genetic markers for studies of phylogenesis and genomic instability. …”
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Analysis of the effect of ALA-PDT on macrophages in footpad model of mice infected with Fonsecaea monophora based on single-cell sequencing by Chen Wenyi, Wu Xuelin, Yaqoob Muhammad Danish, Liu Kangxing, Hu Yanqing, Ke Xiuling, Hu Yongxuan

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Significance of Combining Bronchoalveolar Lavage Fluid With Targeted Next‐Generation Sequencing in the Pathogen Detection‐Based Diagnosis of Pulmonary Infections by Jiangbo Liu, Bo Yang, Yu Wu, Guihong Yang, Xiaojiu Zha, Wei Jiang

Subjects: “…metagenomic next‐generation sequencing…”
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Mechanical and Thermal Adsorption Actions on Epoxy Hybrid Composite Layered with Various Sequences of Alkali-Treated Jute and Carbon Fibre by R. Sasikumar, K. Venkadeshwaran, C. Ramesh Kannan, Melvin Victor De Poures, M. Aruna, N. Mukilarasan, Gopal Kaliyaperumal, Arundeep Murugan

“…The sequences of the sample are named as H1, H2, H3, and H4 layers of JF/JF/JF/JF, CF/CF/CF/CF, JF/CF/CF/JF, and CF/JF/JF/CF. …”
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De Novo Transcriptome Sequencing of the Orange-Fleshed Sweet Potato and Analysis of Differentially Expressed Genes Related to Carotenoid Biosynthesis by Ruijie Li, Hong Zhai, Chen Kang, Degao Liu, Shaozhen He, Qingchang Liu

“…In this study, the transcriptome profiles of an orange-fleshed sweet potato cultivar “Weiduoli” and its mutant “HVB-3” with high carotenoid content were determined by using the high-throughput sequencing technology. A total of 13,767,387 and 9,837,090 high-quality reads were produced from Weiduoli and HVB-3, respectively. …”
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Human Genomic Loci Important in Common Infectious Diseases: Role of High-Throughput Sequencing and Genome-Wide Association Studies by Gerald Mboowa, Ivan Sserwadda, Marion Amujal, Norah Namatovu

“…Application of genome sequencing technologies and genomics has enabled us to interrogate the host-pathogen interface for improving human health. …”
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Candidate genes for domestication and resistance to cold climate according to whole genome sequencing data of Russian cattle and sheep breeds by N. S. Yudin, D. M. Larkin

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Melanoma Mimicking Malignant Peripheral Nerve Sheath Tumor with Spread to the Cerebellopontine Angle: Utility of Next-Generation Sequencing in Diagnosis by Katie Fox Hanson, Paul Birinyi, Ronald Walker, Constantine Raptis, Rebecca Chernock, Jeroen Coppens, Katherine E. Schwetye

“…Over a year after resection of the parotid mass, both a cutaneous primary lentigo maligna melanoma and a metastatic CP angle melanoma were diagnosed in the same patient, prompting reconsideration of the diagnosis in the original parotid-region mass. Next-generation sequencing of a panel of cancer-associated genes demonstrated 19 identical, clinically significant mutations as well as a high tumor mutation burden in both the parotid-region and CP angle tumors, indicating a metastatic relationship between the two and a melanocytic identity of the parotid-region tumor.…”
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Single-cell RNA sequencing of the spleen reveals differences in Salmonella typhimurium infection mechanisms between different chicken breeds by Qi Zhang, Qiao Wang, Jumei Zheng, Jin Zhang, Gaomeng Zhang, Fan Ying, Dawei Liu, Jie Wen, Qinghe Li, Guiping Zhao

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New Results on I2-Statistically Limit Points and I2-Statistically Cluster Points of Sequences of Fuzzy Numbers by Ö. Kişi, M. B. Huban, M. Gürdal

“…In this paper, some existing theories on convergence of fuzzy number sequences are extended to I2-statistical convergence of fuzzy number sequence. …”
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Targeted detection of sequence variants in cell-free DNA from cerebrospinal fluid in pediatric central nervous system tumors by Katrina O’Halloran, Katrina O’Halloran, Erin E. Crotty, Eirini Christodoulou, Sarah E. Leary, Alexandra Miller, Alexandra Miller, Vera A. Paulson, Christina M. Lockwood, Ashley S. Margol, Ashley S. Margol, Jaclyn A. Biegel, Jaclyn A. Biegel

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