MEMPSEP‐III. A Machine Learning‐Oriented Multivariate Data Set for Forecasting the Occurrence and Properties of Solar Energetic Particle Events Using a Multivariate Ensemble Approa... by Kimberly Moreland, Maher A. Dayeh, Hazel M. Bain, Subhamoy Chatterjee, Andrés Muñoz‐Jaramillo, Samuel T. Hart

“…This paper describes a data set created from multiple publicly available observation sources that is validated, cleaned, and carefully curated for our ML pipeline. The data set has been used to drive the newly‐developed Multivariate Ensemble of Models for Probabilistic Forecast of SEPs (MEMPSEP; see MEMPSEP‐I (Chatterjee et al., 2024, https://doi.org/10.1029/2023SW003568) and MEMPSEP‐II (Dayeh et al., 2024, https://doi.org/10.1029/2023SW003697) for accompanying papers).…”
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Versatile waste sorting in small batch and flexible manufacturing industries using deep learning techniques by Arso M. Vukicevic, Milos Petrovic, Nebojsa Jurisevic, Marko Djapan, Nikola Knezevic, Aleksandar Novakovic, Kosta Jovanovic

“…The proposed two-step procedure for generic versatile visual waste sorting is based on the SAM architectures (original SAM, FastSAM, MobileSAMv2, and EfficientSAM) for waste object extraction from raw images, and the use of classification architecture (MobileNetV2, VGG19, Dense-Net, Squeeze-Net, ResNet, and Inception-v3) for accurate waste sorting. Such a pipeline brings two key advantages that make it more applicable in industry practice by: 1) eliminating the necessity for developing dedicated waste detection and segmentation algorithms for waste object localization, and 2) significantly reducing the time and costs required for adapting the solution to different use cases. …”
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Suppression of mycotoxins production and efficient chelation of heavy metals using natural melanin originated from Aspergillus flavus and Aspergillus carbonarius by Nashwa El-Gazzar, Esraa Abdo, Gamal Rabie, Manal Tawfeek El-Sayed

“…Further, the study provides significant evidence regarding the bioremediation pipeline, for melanin production through biotechnological processes by filamentous fungi.…”
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Evaluating translational science knowledge gains following an online short course for a general scientific audience by Amanda L. Vogel, Shadab F. Hussain, Jessica M. Faupel-Badger

“… Abstract Purpose: The translational science workforce requires preparation in both core skills for biomedical research and competencies for advancing progress along the translational pipeline. Delivering this content in a highly accessible manner will help expand and diversify the workforce. …”
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Artificial Intelligence Transforming Post-Translational Modification Research by Doo Nam Kim, Tianzhixi Yin, Tong Zhang, Alexandria K. Im, John R. Cort, Jordan C. Rozum, David Pollock, Wei-Jun Qian, Song Feng

“…Finally, our high-throughput PTM-data-generation pipeline, which formats data suitably for AI training and predictions is described. …”
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2b-RAD genotyping for population genomic studies of Chagas disease vectors: Rhodnius ecuadoriensis in Ecuador. by Luis E Hernandez-Castro, Marta Paterno, Anita G Villacís, Björn Andersson, Jaime A Costales, Michele De Noia, Sofía Ocaña-Mayorga, Cesar A Yumiseva, Mario J Grijalva, Martin S Llewellyn

“…<h4>Methodology/principal findings</h4>The 2b-RAD protocol was carried out in-house at a non-specialized laboratory using 20 R. ecuadoriensis adults collected from the central coast and southern Andean region of Ecuador, from June 2006 to July 2013. 2b-RAD sequencing data was performed on an Illumina MiSeq instrument and analyzed with the STACKS de novo pipeline for loci assembly and Single Nucleotide Polymorphism (SNP) discovery. …”
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Study on the optimal structure of nonmetallic coiled tubing with cable-laying based on the minimum stress in optical fibers by Houbu Li, Xueru Zhang, Xuemin Zhang, Nan Ding, Lei Li

“…The results indicate that the positioning of the cables significantly affects the stress experienced by each integrated layer of the pipeline. Conversely, this positioning exerts minimal influence on the stress distribution within the cables themself. …”
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Multi-modal integration of MRI and global chamber charge density mapping for the evaluation of atrial fibrillation by Alexander J. Sharp, Michael T. B. Pope, Andre Briosa e Gala, Richard Varini, Timothy R. Betts, Abhirup Banerjee

“…Finally, we explore the potential utility of our integrated pipeline through an exploration of the relationship between AF conduction patterns and their proximity to adjacent thoracic structures. …”
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Uncovering Diversity within the Glomeromycota: Novel Clades, Family Distributions, and Land Use Sensitivity by Camille S. Delavaux, Alexis Aellen, Sidney L. Stürmer, Silmar Primieri, Ursel M. E. Schütte, Devin M. Drown, Robert J. Ramos, Thomas W. Crowther, James D. Bever

“…Using a recently developed pipeline for phylogenetic placement of eDNA, we find evidence for three putative novel clades within the Glomeromycota, sister to Entrophosporaceae, Glomeraceae, and Archaeosporaceae, with evidence for geographic structuring. …”
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Physics-Based Self-Supervised Grasp Pose Detection by Jon Ander Ruiz, Ander Iriondo, Elena Lazkano, Ander Ansuategi, Iñaki Maurtua

“…This work introduces our Physics-Based Self-Supervised Grasp Pose Detection (PBSS-GPD) pipeline for model-based grasping point detection, which is useful for generating grasp pose datasets. …”
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Nu—A Marine Life Monitoring and Exploration Submarine System by Ali A. M. R. Behiry, Tarek Dafar, Ahmed E. M. Hassan, Faisal Hassan, Abdullah AlGohary, Mounib Khanafer

“…The vehicle features an onboard live-feed camera with a separate communication system that transmits video to an external real-time machine learning (ML) pipeline for fish species classification, reducing human error by taxonomists. …”
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Structural bioinformatics for rational drug design by Soroush Mozaffari, Agnethe Moen, Che Yee Ng, Gerry A.F. Nicolaes, Kanin Wichapong

“…This review explores the state of the art in computational drug discovery, examining the latest methods and technologies, their transformative impact on the drug development pipeline, and the future directions needed to overcome remaining limitations. …”
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A Comprehensive Approach to Intrusion Detection in IoT Environments Using Hybrid Feature Selection and Multi-Stage Classification Techniques by G. Logeswari, J. Deepika Roselind, K. Tamilarasi, V. Nivethitha

“…This paper presents a novel IDS that integrates Quantum-Inspired Particle Swarm Optimization (QIPSO) with Adaptive Neuro-Fuzzy Inference System (ANFIS) for optimized feature selection, followed by a multi-stage classification pipeline using Capsule Networks (CapsNets) and Attention Augmented-Recurrent Neural Networks (RNNs). …”
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Search for differentially methylated regions in ancient and modern genomes by D. D. Borodko, S. V. Zhenilo, F. S. Sharko

“…By applying this algorithm to test data, we identified 38 differentially methylated regions associated with obesity, the majority of which were located in promoter regions. The pipeline demonstrated sufficient efficiency in detecting these regions. …”
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An Enhanced End-to-End Object Detector for Drone Aerial Imagery by Quan Yu, Qiang Tong, Lin Miao, Lin Qi, Xiulei Liu

“…However, we observe that their pipeline still suffer from several challenges, including unbalanced distribution of positive and negative samples, low-quality initial prediction boxes, and unreasonable gradient structure in the decoding stage. …”
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Deep immunophenotypic dissection and clinical impact of T cells in the follicular lymphoma microenvironment by Sary El Daker, David Qualls, Andriy Derkach, Samida Beqaj, Leonardo Boiocchi, Venkatraman Seshan, Jeeyeon Baik, Menglei Zhu, Gilles Salles, Ahmet Dogan, Mikhail Roshal, Pallavi Galera

“…We analyzed the T-cell composition of a large, well-annotated follicular hyperplasia (FH; n=43) cohort utilizing standardized high dimensionality flow cytometry (>150,000 cells analyzed/sample) and a novel reproducible analytical pipeline leading to identification of even minor T-cell subsets. …”
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Discovering patient groups in sequential electronic healthcare data using unsupervised representation learning by Jingteng Li, Kimberley R. Zakka, John Booth, Louise Rigny, Samiran Ray, Mario Cortina-Borja, Payam Barnaghi, Neil Sebire

“…Results We trained a document embedding model under a unique evaluation pipeline and obtained latent patient feature vectors for all 1853 patients. …”
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Whole-Exome Sequencing Identifies One De Novo Variant in the FGD6 Gene in a Thai Family with Autism Spectrum Disorder by Chuphong Thongnak, Areerat Hnoonual, Duangkamol Tangviriyapaiboon, Suchaya Silvilairat, Apichaya Puangpetch, Ekawat Pasomsub, Wasun Chantratita, Pornprot Limprasert, Chonlaphat Sukasem

“…Each sample was sequenced on SOLiD 5500xl Genetic Analyzer system followed by combined bioinformatics pipeline including annotation and filtering process to identify candidate variants. …”
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Corrosion resistance analysis of Al2O3-TiO2 composite ceramic coatings on carbon steel pipe surfaces by Wei Lan, Zhenhua Chen, Xiang Zhang, Wuxi Bi, Wenhui Liu

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Altered Protein Structures and Neoepitopes in Lupus Neutrophils From Dysregulated Splicing of Messenger RNA by Rayan Najjar, Xiaoxing Wang, Jose Mario Bello Pineda, Hugh Alessi, Alison Bays, Robert K. Bradley, James N. Jarvis, Tomas Mustelin

“…Methods RNA sequencing of neutrophils from patients with SLE (n = 15) and healthy donors (n = 12) were analyzed for mRNA splicing using the RiboSplitter pipeline, an event‐focused tool based on SplAdder with subsequent translation and protein domain annotation. …”
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