Development and validation of a deep learning system for detection of small bowel pathologies in capsule endoscopy: a pilot study in a Singapore institution by Bochao Jiang, Michael Dorosan, Justin Wen Hao Leong, Marcus Eng Hock Ong, Sean Shao Wei Lam, Tiing Leong Ang

“…We then combined the open-source Kvasir-Capsule dataset (n = 43) and locally collected CE data (n = 29). …”
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A dedicated caller for DUX4 rearrangements from whole-genome sequencing data by Pascal Grobecker, Stefano Berri, John F. Peden, Kai-Jie Chow, Claire Fielding, Ivana Armogida, Helen Northen, David J. McBride, Peter J. Campbell, Jennifer Becq, Sarra L. Ryan, David R. Bentley, Christine J. Harrison, Anthony V. Moorman, Mark T. Ross, Martina Mijuskovic

“…Here, we present an open-source software tool designed to detect DUX4-r from short-read, whole-genome sequencing (WGS) data. …”
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Implementation of Minimum Antenatal Care Service Standards in North Lampung Regency by Lisa Suarni, Kodri Kodri, Warjidin Aliyanto, Hasti Primadila, Fajar Desma Wahyudi

“…The sample size was determined using the open-source calculator SSPropor (OpenEpi, version 3), resulting in 595 collected samples for this study. …”
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Identifying Incident Causal Factors to Improve Aviation Transportation Safety: Proposing a Deep Learning Approach by Tianxi Dong, Qiwei Yang, Nima Ebadi, Xin Robert Luo, Paul Rad

“…First, we prepare the data sets used for training, validation, and testing with approximately 200,000 qualified incident reports from the Aviation Safety Reporting System (ASRS). Then, we take an open-source natural language model, which is well trained with a large corpus of Wikipedia texts, as the baseline and fine-tune it with the texts in incident reports to make it more suited to our specific research task. …”
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A portable electrochemical immunosensor for detection of S. aureus based on polyelectrolyte-modified screen-printed carbon electrode by Aleksei A. Evdokimov, Anna A. Baldina, Anna A. Nikitina, Timur A. Aliev, Artemii M. Zenkin, Mikhail V. Zhukov, Igor S. Pantyukhin, Ekaterina V. Skorb, Anton A. Muravev

“…Voltammetric detection of the formation of the sandwich immunocomplex with secondary antibody in the outermost layer (AB–AG–AB-HRP) not only decreases the detection limit to 230 CFU/mL and expands the linear range of detection to 103–108 CFU/mL, but also could detect S. aureus bacteria with a portable open-source custom potentiostat in voltammetric mode, which is promising for non-invasive point-of-care monitoring of pathogens and addresses issues of antibody-based sensors, such as high cost and difficult chemical modification.…”
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OCF Bridging Techniques for UWB/LoRa IoT Ecosystems by Hyun Seob Oh, Wha Sook Jeon, Dong Geun Jeong

“…The OCF has developed not only its own standard but also an open source software framework called IoTivity for efficient implementation of IoT systems. …”
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DataLab as a Service: Distributed Computing Framework for Multi-Interactive Analysis Environments by Aida Palacio Hoz, Andres Heredia Canales, Ezequiel Cimadevilla Alvarez, Marta Obregon Ruiz, Alvaro Lopez Garcia

“…In this work, we introduce a novel framework called Datalab as a Service which integrates cutting-edge and open-source technologies to offer an online platform designed for both resource providers and researchers. …”
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A computational tool to infer enzyme activity using post-translational modification profiling data by Dehui Kong, Aijun Zhang, Ling Li, Zuo-Fei Yuan, Yingxue Fu, Long Wu, Ashutosh Mishra, Anthony A. High, Junmin Peng, Xusheng Wang

“…The JUMPsem program is scalable and publicly available as an open-source R package and user-friendly web-based R/Shiny app. …”
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Analyzing Transit Systems Using General Transit Feed Specification (GTFS) by Generating Spatiotemporal Transit Networks by Diyi Liu, Jing Guo, Yangsong Gu, Meredith King, Lee D. Han, Candace Brakewood

“…<i>GTFS2STN</i> is a new tool that converts General Transit Feed Specification (GTFS) data into spatiotemporal networks, addressing the lack of open-source solutions for transit analysis. The tool includes a web application that generates isochrone maps and calculates travel time variability between locations. …”
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Determining Dust Sources of Middle East and Assessing Their Impact on Agricultural Lands in Euphrates-Tigris River Basin (Syria-Iraq) by Ayhan Ateşoğlu, Metin Tunay, Talha Berk Arıkan, Saffet Yıldız

“…This study was carried out in order to determine the dust sources in the Middle status of Middle East region between 2000-2015years have been analyzed using Collect earth methodology initiated by United Nations Food AND Agriculture Organized (FAO) in Antalya/Turkey on July 2015 and the results were reported by FAO.As being free of charge and an open source tool, the Collect Earth software uses very high resolution multi-temporal images from Google Earth and Bing Maps. …”
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Tracing the 2018 Sulawesi Earthquake and Tsunami’s Impact on Palu, Indonesia: A Remote Sensing Analysis by Youshuang Hu, Aggeliki Barberopoulou, Magaly Koch

“…Unlike many studies that rely on advanced or proprietary tools, we demonstrate that comparable results can be achieved with cost-effective open-source data and straightforward methodologies. …”
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An Interactive Computational Pipeline to Investigate Ventricular Hemodynamics with Real‐Time Three‐Dimensional Echocardiography and Computational Fluid Dynamics by Jan‐Niklas Thiel, Daniel Verhülsdonk, Ulrich Steinseifer, Katharina Linden, Ulrike Herberg, Ingeborg Friehs, Daniel Diaz‐Gil, Michael Neidlin

“…In this work, we introduce IP‐HEART—an interactive and open‐source computational pipeline to perform geometry processing for CFD models of ventricular blood flow. …”
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Cross-project software defect prediction based on the reduction and hybridization of software metrics by Ahmed Abdu, Zhengjun Zhai, Hakim A. Abdo, Sungon Lee, Mohammed A. Al-masni, Yeong Hyeon Gu, Redhwan Algabri

“…The experimental analysis conducted using nine open-source projects from the PROMISE dataset demonstrates that RH-CPDP surpasses current CPDP methods (TCSBoost, TPTL, DA-KTSVMO, DBN, and 3SW-MSTL) regarding area under the curve (AUC) and F1-measure. …”
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A Machine Learning Approach for the Autonomous Identification of Hardness in Extraterrestrial Rocks from Digital Images by Shuyun Liu, Haifeng Zhao, Zihao Yuan, Liping Xiao, Chengcheng Shen, Xue Wan, Xuhai Tang, Lu Zhang

“…The model is used to predict the hardness distribution of extraterrestrial rocks using images from the Tianwen-1 Mars Rover Navigation and Terrain Camera (NaTeCam) and a simulated lunar rock dataset from an open-source website. The results demonstrate the method’s potential for enhancing extraterrestrial exploration.…”
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Validation Psychometrical analysis of Sexual Machism Scale (EMS-Sexism-12) among university students from Arequipa, Peru by Julio Cesar Huamani-Cahua, Estefany Cecilia Ojeda-Flores, Walter L Arias-Gallegos, Ferdinand Eddington Ceballos Bejarano, José Manuel Calizaya López

“…Results: The data were analysed using CFA and the WLSMV estimator along with polychoric correlation matrices in the open-source software Rstudio. The analysis revealed a unidimensional model with good fit indices for both men (CFI = .924, TLI = .907, SMRM = 0.069) and women (CFI = .936, TLI = .922, SMRM = 0.051). …”
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Refactoring BZIP2 on the new‐generation sunway supercomputer by Xiaohui Liu, Zekun Yin, Haodong Tian, Wubing Wan, Mengyuan Hua, Wenlai Zhao, Zhenchun Huang, Ping Gao, Fangjin Zhu, Hua Wang, Xiaohui Duan

“…In particular, the BZIP2 lossless compression algorithm has been widely used due to its exceptional compression ratio, moderate compression speed, high reliability, and open‐source nature. This paper focuses on the design and realization of a parallelized BZIP2 algorithm tailored for deployment on the New‐Generation Sunway supercomputing platform. …”
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MBI-KG: A knowledge graph of structured and linked economic research data extracted from the 1937 book “Die Maschinen-Industrie im Deutschen Reich”MADATA by Renat Shigapov, Thomas Schmidt, Jan Kamlah, Irene Schumm, Jochen Streb, Sibylle Lehmann-Hasemeyer

“…The semantically enriched data was uploaded into an open-source knowledge-graph software. The resulting knowledge graph includes detailed information about companies, individuals, and administrative entities relevant to the German mechanical engineering industry. …”
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Medyalararası Gündem Belirleme Çalışmalarında R Stüdyo Kullanımı: Rozelle-Campbell Taban Hizası ile Çapraz Gecikmeli Korelasyonun Bilişimleştirilmesi by Özlem Alikılıç, İnanç Alikılıç

“…It is licensed for a free and an open-source software. There are many researchers have released applications for general use in “R” after they have been introduced into the literature. …”
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Smell-ML: A Machine Learning Framework for Detecting Rarely Studied Code Smells by Esraa Hamouda, Abeer El-Korany, Soha Makady

“…We evaluated Smell-ML on a dataset composed of 13 open source Java projects with 125 versions per project. …”
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LINKS. A System for Historical Family Reconstruction in the Netherlands by Kees Mandemakers, Gerrit Bloothooft, Fons Laan, Joe Raad, Rick J. Mourits, Richard L. Zijdeman

“…We will discuss two matching systems, the first is the original querying system that runs within a MySQL database environment and the second is a newly developed system, called burgerLinker, which is based on knowledge graphs and which is designed as a system that can be used independently from LINKS and is made available as open source software. Finally, we present the most important releases of LINKS data so far: two national releases that link birth and parental marriage certificates, creating families and pedigrees and an integrated dataset of persons, families and family trees in four provinces. …”
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