Pan-genome-scale metabolic modeling of Bacillus subtilis reveals functionally distinct groups by Maxwell Neal, William Brakewood, Michael Betenbaugh, Karsten Zengler

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A Guide to Metabolic Network Modeling for Plant Biology by Xiaolan Rao, Wei Liu

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Personalized whole‐body models integrate metabolism, physiology, and the gut microbiome by Ines Thiele, Swagatika Sahoo, Almut Heinken, Johannes Hertel, Laurent Heirendt, Maike K Aurich, Ronan MT Fleming

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A computational study of the Warburg effect identifies metabolic targets inhibiting cancer migration by Keren Yizhak, Sylvia E Le Dévédec, Vasiliki Maria Rogkoti, Franziska Baenke, Vincent C de Boer, Christian Frezza, Almut Schulze, Bob van de Water, Eytan Ruppin

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Metabolic memory underlying minimal residual disease in breast cancer by Ksenija Radic Shechter, Eleni Kafkia, Katharina Zirngibl, Sylwia Gawrzak, Ashna Alladin, Daniel Machado, Christian Lüchtenborg, Daniel C Sévin, Britta Brügger, Kiran R Patil, Martin Jechlinger

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Understanding the physiology of Lactobacillus plantarum at zero growth by Philippe Goffin, Bert van de Bunt, Marco Giovane, Johan H J Leveau, Sachie Höppener‐Ogawa, Bas Teusink, Jeroen Hugenholtz

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In silico metabolic modelling links microbiome-derived metabolites to risk factors of Alzheimer’s disease by Tim Hensen, Shahzad Ahmad, Gabi Kastenmüller, Robert Kraaij, Mohsen Ghanbari, Arfan Ikram, Rima Kaddurah-Daouk, Ines Thiele

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Proteome constraints reveal targets for improving microbial fitness in nutrient‐rich environments by Yu Chen, Eunice van Pelt‐KleinJan, Berdien van Olst, Sieze Douwenga, Sjef Boeren, Herwig Bachmann, Douwe Molenaar, Jens Nielsen, Bas Teusink

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How the Topology of the Mitochondrial Inner Membrane Modulates ATP Production by Raquel Adams, Nasrin Afzal, Mohsin Saleet Jafri, Carmen A. Mannella

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A temperature-induced metabolic shift in the emerging human pathogen Photorhabdus asymbiotica by Elena Lucy Carter, Nicholas R. Waterfield, Chrystala Constantinidou, Mohammad Tauqeer Alam

Subjects: “…metabolic modeling…”
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Transcriptome enhanced rice grain metabolic model identifies histidine level as a marker for grain chalkiness by Niaz Bahar Chowdhury, Anil Kumar Nalini Chandran, Harkamal Walia, Rajib Saha

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Dissecting the energy metabolism in Mycoplasma pneumoniae through genome‐scale metabolic modeling by Judith A H Wodke, Jacek Puchałka, Maria Lluch‐Senar, Josep Marcos, Eva Yus, Miguel Godinho, Ricardo Gutiérrez‐Gallego, Vitor A P Martins dos Santos, Luis Serrano, Edda Klipp, Tobias Maier

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An integrated computational and experimental study uncovers FUT9 as a metabolic driver of colorectal cancer by Noam Auslander, Chelsea E Cunningham, Behzad M Toosi, Emily J McEwen, Keren Yizhak, Frederick S Vizeacoumar, Sreejit Parameswaran, Nir Gonen, Tanya Freywald, Kalpana K Bhanumathy, Andrew Freywald, Franco J Vizeacoumar, Eytan Ruppin

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Vibrio natriegens genome‐scale modeling reveals insights into halophilic adaptations and resource allocation by Lucas Coppens, Tanya Tschirhart, Dagmar H Leary, Sophie M Colston, Jaimee R Compton, William Judson Hervey, Karl L Dana, Gary J Vora, Sergio Bordel, Rodrigo Ledesma‐Amaro

Subjects: “…genome‐scale metabolic modeling…”
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Developing a media formulation to sustain ex vivo chloroplast function by Mariam Mohagheghi, Ali Navid, Thomas Mossington, Congwang Ye, Matthew A. Coleman, Steven Hoang-Phou

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Genome‐scale metabolic modeling reveals SARS‐CoV‐2‐induced metabolic changes and antiviral targets by Kuoyuan Cheng, Laura Martin‐Sancho, Lipika R Pal, Yuan Pu, Laura Riva, Xin Yin, Sanju Sinha, Nishanth Ulhas Nair, Sumit K Chanda, Eytan Ruppin

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Genome-scale metabolic model of Staphylococcus epidermidis ATCC 12228 matches in vitro conditions by Nantia Leonidou, Alina Renz, Benjamin Winnerling, Anastasiia Grekova, Fabian Grein, Andreas Dräger

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Metabolic growth-coupling strategies for in vivo enzyme selection systems by Tobias B. Alter, Pascal A. Pieters, Colton J. Lloyd, Adam M. Feist, Emre Özdemir, Bernhard O. Palsson, Daniel C. Zielinski

Subjects: “…Constraint-based metabolic modeling…”
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MINN: A metabolic-informed neural network for integrating omics data into genome-scale metabolic modeling by Gabriele Tazza, Francesco Moro, Dario Ruggeri, Bas Teusink, László Vidács

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Multi‐Omics and ‐Organ Insights into Energy Metabolic Adaptations in Early Sepsis Onset by Lin‐Lin Xu, Zhengyuan Zhou, Sascha Schäuble, Wolfgang Vivas, Karen Dlubatz, Michael Bauer, Sebastian Weis, Mervyn Singer, Roman Lukaszewski, Gianni Panagiotou

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