Polymorphism of the mannose-binding lectin gene in the Arctic indigenous populations of the Russian Federation by S. Yu. Tereshchenko, M. V. Smolnikova

“…Data on the genotype and haplotype frequencies of the MBL2 gene among indigenous peoples of the Russian Arctic territories was first obtained in the study. …”
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The genome sequence of Cory’s shearwater, Calonectris borealis (Cory, 1881) [version 1; peer review: 2 approved] by Joan Ferrer Obiol, Guillem Izquierdo Arànega, Marta Riutort León, Raül Ramos Garcia, Jacob González-Solís Bou, Julio Rozas Liras

“…We present a genome assembly from an individual female Calonectris borealis (Cory’s shearwater; Chordata; Aves; Procellariiformes; Procellariidae). The haplotype-resolved assembly contains two haplotypes with total lengths of 1,366.19 megabases and 1,211.47 megabases, respectively. …”
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Genetic differentiation and historical dynamics of the endemic species Rheum pumilum on the Qinghai-Tibetan Plateau inferred from phylogeography implications by Shuliang Liu, Jianxin Gao, Bo Xiao, Wenjie Guo, Qiushi Yu, Ailan Wang, Weiwei Li

“…Results The examination of 39 haplotypes across 26 populations of Rh. pumilum reveals distinct regional distribution, reflecting a phylogeographic pattern resembling “alpine-island”. …”
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Populations of the Invasive Mussel <i>Mytella strigata</i> in China Showed Lower Genetic Diversity in Autumn than in Spring by Peizhen Ma, Chenxia Zuo, Shaojing Yan, Xiangyu Wu, Xiaojie Ma, Yi Zhu, Zhen Zhang

“…The Zhanjiang population had the highest genetic diversity in spring with 22 haplotypes, 37 polymorphic sites, and haplotype diversity, nucleotide diversity, and the average number of nucleotide differences being 0.911, 0.00623, and 4.341, respectively. …”
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The Association of the GABRP Polymorphisms with Systemic Lupus Erythematosus by Hun-Soo Kim, Eun-Heui Jin, Ji-Su Mo, Hyeok Shim, Shin-Seok Lee, Soo-Cheon Chae

“…Additional analysis showed that the genotype of the rs929763 and rs3805455 of the GABRP gene were also significantly associated with female SLE patients (P<0.0001, P=0.005, resp.). Two haplotype frequencies including a major haplotype of GABRP SNPs were more significantly different between the SLE patients and the healthy controls (P=0.038 and 4.2E-24, resp.). …”
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Genetic Diversity, Repeat Motifs, and Natural Selection at the C-Terminal Knob-Associated Histidine Rich Protein (KAHRP) of Plasmodium falciparum Clinical Samples from Saudi Arabia by Saad M. Bin Dajem, Md Atique Ahmed, Marie Fe F Bohol, Syeda Wasfeea Wazid, Mohammed I. Shafeai, Fuad H. Rudiny, Ali M. Motaen, Kareem Morsy, Hani Alothaid, Ahmed A. Al-Qahtani

“…The DnaSP v5.10 software was used to determine the genetic diversity, polymorphism, haplotype, and natural selection. Haplotype network analysis was constructed by using the median-joining method in the NETWORK version 5.0.0.1 software. …”
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Association between rs20456 and rs6930913 of Kinesin-Like Family 6 and Hypertension in a Chinese Cohort by Yan-li Chen, Li-Qiang Zheng, Tie-Jun Li, Zhao-Qing Sun, Ying Hao, Bao-Gang Wu, Ying-Xian Sun

“…The allele C (rs20456) and allele T (rs690913) were inclined to protect individuals from hypertension both in genotype and haplotype analyses.…”
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MAO-B Polymorphism Associated with Progression in a Chinese Parkinson’s Disease Cohort but Not in the PPMI Cohort by Shi-Shuang Cui, Ling-Yu Wu, Gen Li, Juan-Juan Du, Pei Huang, Jin Liu, Yun Ling, Kang Ren, Zhong-Lue Chen, Sheng-Di Chen

“…The RIT2 rs12456492 and SNCA haplotypes were associated with motor function decline, and the PARK16 haplotype was associated with progression in mood in the PPMI cohort.…”
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Genetic Variation Analysis of Hsp101 Gene in Common Wild Rice and Asian Cultivated Rice Germplasm Resources by Yue LIU, Liqun JIANG, Shuwei LYU, Bingrui SUN, Chen LI, Qing LIU, Hang YU

“…Further analyses including haplotype network analysis and phylogenetic analysis indicated that the wide rice haplotype Hap8 may be the oldest allele of the Hsp101 gene. …”
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Investigating ITM2B‐associated ataxia in a Taiwanese cerebellar ataxia cohort by Shih‐Yu Fang, Cheng‐Tsung Hsiao, Kang‐Yang Jih, Yu‐Sheun Tsai, Kuan‐Lin Lai, Cheng‐Ta Chou, Yi‐Chu Liao, Yi‐Chung Lee

“…(Ter267LeuextTer11)), was identified in three patients. Haplotype analysis demonstrated a shared haplotype linked to this variant in the three families, suggesting a founder effect. …”
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Review on Haploidentical Hematopoietic Cell Transplantation in Patients with Hematologic Malignancies by William A. Fabricius, Muthalagu Ramanathan

“…A human leukocyte antigen- (HLA-) haploidentical donor is a recipient’s relative who shares an exact haplotype with the recipient but is mismatched for HLA genes on the unshared haplotype. …”
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The important roles of ERAP1, ERAP2 genes polymorphisms and their DNA methylation levels in pulmonary tuberculosis by Shi-Hong Su, Xue-Qian Cai, Yong-Huai Li, Ai-Hui Xu, Qian Huang, Hua Niu, Qing-Hai You, Geng-Yun Sun

“…Among PTB patients, the frequencies of rs17524572 TT genotype, T allele were significantly associated with drug-induced liver injury, and rs1230358, rs2549782, rs2549794 polymorphisms were linked to the occurrence of fever. Haplotype analysis of ERAP2 gene suggested that the frequency of CTGGT haplotype was higher, while the frequency of CTGTT haplotype was lower in PTB patients. …”
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Association between METTL14 gene polymorphisms and risk of ovarian endometriosis by Zijun Zhou, Zijun Zhou, Youkun Jie, Xianyue Hu, Xianyue Hu, Guange Chen, Yanjing Bao, Yanjing Bao, Zhenbo OuYang, Liangzhi Wu, Tianyang Gao, Qiushi Zhang, Qiushi Zhang, Wenfeng Hua, Wenfeng Hua

“…Stratified analysis revealed the risk effect of rs298982 GA/AA genotypes in the gravidity≤1, parity≤1, rASRM stage I, and rASRM stage II + III + IVsubgroups. Haplotype analysis showed that individuals with the GATAA haplotype were at higher risk of ovarian endometriosis (AOR = 5.54, 95% CI = 1.63–18.87, P = 0.006), whereas the AGTTG haplotype exhibited protective effects (AOR = 0.55, 95% CI = 0.31–0.97, P = 0.039) compared with wild-type GACAG haplotype carriers. …”
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Genetic diversity and population structure of the helminths intermediate host Anentome helena (von dem Busch, 1847) in northern Thailand by Nithinan Chomchoei, Chalobol Wongsawad, Preeyaporn Butboonchoo, Nattawadee Nantarat

“…High levels of genetic diversity in terms of haplotype diversity were found in parasitic infected populations. …”
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Chloroplast DNA Diversity of Tunisian Barley Landraces as Revealed by cpSSRs Molecular Markers and Implication for Conservation Strategies by Marwa Snoussi, Leila Riahi, Mériam Ben Romdhane, Ahmed Mliki, Nejia Zoghlami

“…Thirteen alleles were detected across the studied sample, which were combined into 8 haplotypes, giving a haplotype diversity (Hd) of 0.847. …”
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Determination of genetic diversity between natural and cultured populations of Common Dentex (Dentex dentex) fish in the East Aegean Sea by Kayaci Ali, Can Mehmet Fatih, Güner Yusuf, Güleç Fatih

“…Sequence analysis showed that the highest haplotype diversity was obtained from the aquaculture facility in Karaburun and Antalya Locations, Turkey. …”
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Interleukin-1 Gene Variability and Plasma Levels in Czech Patients with Chronic Periodontitis and Diabetes Mellitus by Petra Borilova Linhartova, Hana Poskerova, Marie Tomandlova, Jirina Bartova, Katerina Kankova, Antonin Fassmann, Lydie Izakovicova Holla

“…In T1DM patients, IL-1RN∗S “short” allele and IL-1RN 12 genotype were significantly less frequent than those in controls (P<0.01). In haplotype analysis, TTL haplotype decreased the risk of CP development (P<0.01), whereas CCS and CTL haplotypes (P<0.01 and P<0.05) were associated with T1DM. …”
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Uteroglobin 基因 G38A 多态性与 IgA 肾病相关关系 by 李幼姬, 李彩霞, 杨念生, 黄锋先, 方积乾

“…【方法】 用PCR-RFLP法和PCR产物直接测序法鉴定基因型,采用以家庭为基础的传递不平衡检验(transmission disequilibrium test ,TDT)?单倍体相对风险(haplotype-based haplotype relative risk, HRR)分析,以及病例-对照研究分析Uteroglobin 基因G38A多态性与我国IgA肾病的相关关系?…”
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DNA Barcoding Reveals Widespread Co-Occurrence of Other Chub Species in the Range of the Endemic Catalan Chub, <i>Squalius laietanus</i> by Núria Pérez-Bielsa, Sandra Heras, Alba Abras, Jose-Luis García-Marín

“…This haplotype was present in six sites in four basins, being particularly abundant in the Ebro River. …”
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Genetic Characterization of Domesticated F1 Generation in Humpback Grouper (Cromileptes altivelis) by Ratu Siti Aliah, . Wahidah, K. Sumantadinata, Estu Nugroho, O. Carman

“…The result of study showed that reducing of haplotype diversity had been arised from broodstock (0.8548) to F1 generation population (0.7473; 0.7273; and 0.6947, respectively).  …”
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