In Vitro Susceptibility and Florfenicol Resistance in Citrobacter Isolates and Whole-Genome Analysis of Multidrug-Resistant Citrobacter freundii by Wangxiao Zhou, Qianqian Chen, Changrui Qian, Kai Shen, Xinyi Zhu, Danying Zhou, Wei Lu, Zhewei Sun, Hongmao Liu, Kewei Li, Teng Xu, Qiyu Bao, Junwan Lu

“…International Journal of Genomics…”
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Endophytic strategies decoded by genome and transcriptome analysis of Fusarium nematophilum strain NQ8GII4 by Siyuan Yan, Qingchen Zhang, Shuxin Jia, Miaomiao Guo, Qiangqiang Zhang, Peiwen Gu, Peiwen Gu

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Hindguts of Kyphosus sydneyanus harbor phylogenetically and genomically distinct Alistipes capable of degrading algal polysaccharides and diazotrophy by Cesar T. Facimoto, Kendall D. Clements, W. Lindsey White, Kim M. Handley

“…To further explore host-associated traits unique to K. sydneyanus-derived Alistipes, we compared 445 high-quality genomes of Alistipes available in public databases (e.g., human and ruminant associated) with 99 metagenome-assembled genomes (MAGs) from the K. sydneyanus gut. …”
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NLRP7 maintains the genomic stability during early human embryogenesis via mediating alternative splicing by Zhongliang Chen, Liangxia Jiang, Min Su, Qibing Zeng, Peng Luo, Liangzhao Chu

“…Abstract Genomic instability is the main cause of abnormal embryo development and abortion. …”
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A Y chromosome-linked genome editor for efficient population suppression in the malaria vector Anopheles gambiae by Ignacio Tolosana, Katie Willis, Matthew Gribble, Lee Phillimore, Austin Burt, Tony Nolan, Andrea Crisanti, Federica Bernardini

“…Here, instead, we describe a self-limiting strategy, designed to have geographically and temporally restricted effect, based on a Y chromosome-linked genome editor (YLE). The YLE comprises a CRISPR-Cas9 construct that is always inherited by males yet generates an autosomal dominant mutation that is transmitted to over 90% of the offspring and results in female-specific sterility. …”
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Deciphering mixed infections by plant RNA virus and reconstructing complete genomes simultaneously present within-host. by Martine Bangratz, Aurore Comte, Estelle Billard, Abdoul Kader Guigma, Guillaume Gandolfi, Abalo Itolou Kassankogno, Drissa Sérémé, Nils Poulicard, Charlotte Tollenaere

“…This method was validated by the successful reconstruction of two viral genomes that were less than a hundred nucleotides apart (out of a genome of 4450nt length, i.e. 2-3%), and present in artificial mixes at a ratio of up to a 99/1. …”
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Short Reads Phasing to Construct Haplotypes in Genomic Regions That Are Associated with Body Mass Index in Korean Individuals by Kichan Lee, Seonggyun Han, Yeonjeong Tark, Sangsoo Kim

Subjects: “…genome-wide association study…”
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Irradiation-induced Deinococcus radiodurans genome fragmentation triggers transposition of a single resident insertion sequence. by Cécile Pasternak, Bao Ton-Hoang, Geneviève Coste, Adriana Bailone, Michael Chandler, Suzanne Sommer

“…High radiation levels result in genome fragmentation and reassembly in a process which generates significant amounts of single-stranded DNA. …”
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The mitochondrial genome of <i>Dendrobaena tellermanica</i> Perel, 1966 (Annelida: Lumbricidae) and its phylogenetic position by S. V. Shekhovtsov, G. V. Vasiliev, R. Latif, T. V. Poluboyarova, S. E. Peltek, I. B. Rapoport

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Somatic Mitochondrial DNA Point Mutations Used as Biomarkers to Demonstrate Genomic Heterogeneity in Primary Prostate Cancer by Christian Arstad, Kristin Taskén, Paulo Refinetti, Ulrika Axcrona, Karl-Erik Giercksky, Per Olaf Ekstrøm

“…The growth of tumor cells is accompanied by mutations in nuclear and in mitochondrial genomes. Thus, mitochondrial DNA mutations may be used as tumor cell markers. …”
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Deciphering mixed infections by plant RNA virus and reconstructing complete genomes simultaneously present within-host by Martine Bangratz, Aurore Comte, Estelle Billard, Abdoul Kader Guigma, Guillaume Gandolfi, Abalo Itolou Kassankogno, Drissa Sérémé, Nils Poulicard, Charlotte Tollenaere

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Molecular detection and genomic characterization of Samak Micromys paramyxovirus-1 and -2 in Micromys minutus, Republic of Korea by Augustine Natasha, Sarah E. Pye, Seung Hye Cho, Haryo Seno Pangestu, Jieun Park, Kyungmin Park, Sara P. Prayitno, Bohyeon Kim, Jong Sun Lee, Jongwoo Kim, Shailesh Budhathoki, Yeonsu Oh, Jin-Won Song, Carolina B. López, Jun Gyo Suh, Won-Keun Kim

“…Among them, four whole genome sequences were identified and clustered within the genus Jeilongvirus. …”
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Robust and inducible genome editing via an all-in-one prime editor in human pluripotent stem cells by Youjun Wu, Aaron Zhong, Mega Sidharta, Tae Wan Kim, Bernny Ramirez, Benjamin Persily, Lorenz Studer, Ting Zhou

“…Abstract Prime editing (PE) allows for precise genome editing in human pluripotent stem cells (hPSCs), such as introducing single nucleotide modifications, small insertions or deletions at a specific genomic locus. …”
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Genome-wide association data reveal a global map of genetic interactions among protein complexes. by Gregory Hannum, Rohith Srivas, Aude Guénolé, Haico van Attikum, Nevan J Krogan, Richard M Karp, Trey Ideker

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Chromosome-level Genome Assembly of Korean Long-tailed Chicken and Pangenome of 40 Gallus gallus Assemblies by Hanshin D. Shin, Wonchoul Park, Han-ha Chai, Youngho Lee, Jaehoon Jung, Byung June Ko, Heebal Kim

“…Abstract This study presents the first chromosome-level genome assembly of the Korean long-tailed chicken (KLC), a unique breed of Gallus gallus known as Ginkkoridak. …”
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Genetic diversity and transmission pattern of multidrug-resistant tuberculosis based on whole-genome sequencing in Wuhan, China by Liqing Wei, Jun Chen, Zhen Deng, Zefang Zhang, Zhengbin Zhang, Qionghong Duan

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Droplet-based high-throughput 3D genome structure mapping of single cells with simultaneous transcriptomics by Honggui Wu, Maoxu Wang, Yinghui Zheng, X. Sunney Xie

“…Abstract Single-cell three-dimensional (3D) genome techniques have advanced our understanding of cell-type-specific chromatin structures in complex tissues, yet current methodologies are limited in cell throughput. …”
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The first complete mitochondrial genome sequence of the common Baya weaverbird (Ploceus philippinus) from southern India by Venkatesh Nagarajan-Radha, Subanithi-Purnima Murugan, Paramanantha Swami Doss Devaraj

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The complete mitochondrial genome of an important medicinal plant, Rehmannia glutinosa (Gaertn.) DC., 1845 (Lamiales, Orobanchaceae) by Yu Bai, Huan An, Rengang Zhang, Yanna Ma, Hongjia Zhang, Zhili Guo, Li Zhao, Zhaoxuan Wang

“…In this study, the complete mitochondrial genome (mitogenome) of R. glutinosa was sequenced and assembled for the first time. …”
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Evolutionary Genomics Provides Insights Into Endangerment and Conservation of a Wild Apple Tree Species, Malus sieversii by Jian Zhang, Fang‐Yuan Zhao, Hong‐Xiang Zhang

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