Detecting outliers in segmented genomes of flu virus using an alignment-free approach by Mosaab Daoud

“…Genomics & Informatics…”
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UV-induced reorganization of 3D genome mediates DNA damage response by Veysel Oğulcan Kaya, Ogün Adebali

“…Abstract While it is well-established that UV radiation threatens genomic integrity, the precise mechanisms by which cells orchestrate DNA damage response and repair within the context of 3D genome architecture remain unclear. …”
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Algorithms for Processing Coronavirus Genomes for the Goals and Objectives of Modern Immunoinformatics, Vaccinomics, and Virology by M. V. Sprindzuk, A. S. Vladyko, L. P. Titov, Lu Zhuozhuang, V. I. Bernik

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An optimized CTAB method for genomic DNA extraction from green seaweeds (Ulvophyceae) by Riyad Hossen, Myles Courtney, Alasdair Sim, Md Abdullah Al Kamran Khan, Heroen Verbruggen, Trevor Bringloe

“…Abstract Premise Seaweeds are gaining substantial research interest, particularly for genomic applications, where high‐quality DNA is a prerequisite. …”
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NMD Microarray Analysis for Rapid Genome-Wide Screen of Mutated Genes in Cancer by Maija Wolf, Henrik Edgren, Aslaug Muggerud, Sami Kilpinen, Pia Huusko, Therese Sørlie, Spyro Mousses, Olli Kallioniemi

“…We combined NMD microarrays with array-based CGH (comparative genomic hybridization) in order to identify inactivation of tumor suppressor genes in cancer. …”
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Whole genome sequencing, assembly and annotation of the Southern Ground Hornbill – Bucorvus leadbeateri by Jasmin Patel, Angela Botes, Jean Mollett, Pieter De Maayer

“…The availability of this genome will aid in improving our current understanding of this bird at a genomic level and provide a pivotal foundation for comparative genomic analysis with other hornbill species.…”
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Genome sequence of Streptomyces antioxidans MUSC 164T isolated from mangrove forest by Hooi-Leng Ser, Nurul-Syakima Ab Mutalib, Wai-Fong Yin, Bey-Hing Goh, Learn-Han Lee, Kok-Gan Chan

“…Here we report the high quality genome sequence of MUSC 164T, while 34 discussing its genome potential to produce pharmaceutically important compounds.…”
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Microbial Genome Sequencing: Prospects for Development of Novel Vaccines and Anti-Microbial Compounds by Claire M. Fraser

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Innovative strategies for precision medicine: Incorporating genomic discoveries in the treatment of oral cancer by P. Thamarai, A. Saravanan

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Brief Overview of a Decade of Genome-Wide Association Studies on Primary Hypertension by Afifah Binti Azam, Elena Aisha Binti Azizan

“…Primary hypertension is widely believed to be a complex polygenic disorder with the manifestation influenced by the interactions of genomic and environmental factors making identification of susceptibility genes a major challenge. …”
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Genomic insights into ecological adaptation of oaks revealed by phylogenomic analysis of multiple species by Tian-Rui Wang, Xin Ning, Si-Si Zheng, Yu Li, Zi-Jia Lu, Hong-Hu Meng, Bin-Jie Ge, Gregor Kozlowski, Meng-Xiao Yan, Yi-Gang Song

“…Quercus is a keystone genus in Northern Hemisphere forests, and its wide distribution in diverse ecosystems and long evolutionary history make it an ideal model for studying the genomic basis of ecological adaptations. Here we used a newly sequenced genome of Quercus gilva, an evergreen oak species from East Asia, with 18 published Fagales genomes to determine how Fagaceae genomes have evolved, identify genomic footprints of ecological adaptability in oaks in general, as well as between evergreen and deciduous oaks. …”
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Transcriptome Concordance Between Borderline Tumors and Endometrioid Carcinoma: An Integrative Genomic Analysis by Mio Takahashi, Kohei Nakamura, Tatsuyuki Chiyoda, Chihiro Okada, Sachio Nohara, Reika Takamatsu, Shintaro Yanazume, Hiroaki Kobayashi, Hiroshi Nishihara, Wataru Yamagami

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Mining functional gene modules by multi-view NMF of phenome-genome association by Xu Jin, WenQian He, MingMing Liu, Lin Wang, YaoGong Zhang, YingJie Xu, Ling Ma, YaLou Huang, MaoQiang Xie

“…BMC Genomics…”
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Novel insights into insect mediated polystyrene biodegradation through bacterial genome analyses by Felice Zarra, Rebecca Funari, Claudio Cucini, Francesco Nardi, Antonio Carapelli, Laura Marri, Francesco Frati

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An Efficient Genome Fragment Assembling Using GA with Neighborhood Aware Fitness Function by Satoko Kikuchi, Goutam Chakraborty

“…To decode a long genome sequence, shotgun sequencing is the state-of-the-art technique. …”
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Comparison of whole genome sequencing performance from fish swabs and fin clips by Annabell Macphee, Temitope Opeyemi Oriowo, Nils Sternberg, Madlen Stange

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The complete mitochondrial genome of Neobythites sivicola (Jordan & Snyder, 1901) (Ophidiiformes: Ophidiidae) by Xiaojing Song, Ruijie Zhang, Hanye Zhang, Shengfa Li, Jianzhong Ling

“…In this study, we assembled and reported the complete mitochondrial genome of N. sivicola for the first time. The mitochondrial genome is 17,316 bp in length and contains 13 PCGs, 2 rRNAs, and 22 tRNAs. …”
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Facile, High Quality Sequencing of Bacterial Genomes from Small Amounts of DNA by Momchilo Vuyisich, Ayesha Arefin, Karen Davenport, Shihai Feng, Cheryl Gleasner, Kim McMurry, Beverly Parson-Quintana, Jennifer Price, Matthew Scholz, Patrick Chain

“…International Journal of Genomics…”
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Genome-scale data resolve ancestral rock-inhabiting lifestyle in Dothideomycetes (Ascomycota) by Claudio G. Ametrano, Felix Grewe, Pedro W. Crous, Stephen B. Goodwin, Chen Liang, Laura Selbmann, H. Thorsten Lumbsch, Steven D. Leavitt, Lucia Muggia

“…We assembled phylogenomic datasets from newly sequenced (4) and previously available genomes (238) of 242 taxa. We explored the influence of tree inference methods, supermatrix vs. coalescent-based species tree, and the impact of varying amounts of genomic data. …”
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