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  1. 101
    Insights into the nuclear-organelle DNA integration in Cicuta virosa (Apiaceae) provided by complete plastid and mitochondrial genomes

    Insights into the nuclear-organelle DNA integration in Cicuta virosa (Apiaceae) provided by complete plastid and mitochondrial genomes by Seongjun Park, Yong Hwang, Heesoo Kim, KyoungSu Choi

    Published 2025-02-01
    “…BMC Genomics…”
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  2. 102
    Correction: Prognostic impact of donor mitochondrial genomic variants in myelodysplastic neoplasms after stem-cell transplantation

    Correction: Prognostic impact of donor mitochondrial genomic variants in myelodysplastic neoplasms after stem-cell transplantation by Jing Dong, Shahram Arsang-Jang, Tao Zhang, Zhongyuan Chen, Yung-Tsi Bolon, Stephen Spellman, Raul Urrutia, Paul Auer, Wael Saber

    Published 2025-02-01
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  3. 103
    MacSyFinder v2: Improved modelling and search engine to identify molecular systems in genomes

    MacSyFinder v2: Improved modelling and search engine to identify molecular systems in genomes by Néron, Bertrand, Denise, Rémi, Coluzzi, Charles, Touchon, Marie, Rocha, Eduardo P.C., Abby, Sophie S.

    Published 2023-03-01
    “…Complex cellular functions are usually encoded by a set of genes in one or a few organized genetic loci in microbial genomes. Macromolecular System Finder (MacSyFinder) is a program that uses these properties to model and then annotate cellular functions in microbial genomes. …”
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  4. 104
    Protocol to Identify Unknown Flanking DNA Using Partially Overlapping Primer-based PCR for Genome Walking

    Protocol to Identify Unknown Flanking DNA Using Partially Overlapping Primer-based PCR for Genome Walking by Mengya Jia, Dongqin Ding, Xiaohua Liu, Haixing Li

    Published 2025-02-01
    “…Genome walking is a popular molecular technique for accessing unknown flanking DNAs, which has been widely used in biology-related fields. …”
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  5. 105
    Sequencing whole genomes of the West Javanese population in Indonesia reveals novel variants and improves imputation accuracy

    Sequencing whole genomes of the West Javanese population in Indonesia reveals novel variants and improves imputation accuracy by Edwin Ardiansyah, Anca-Lelia Riza, Sofiati Dian, Sofiati Dian, Ahmad Rizal Ganiem, Ahmad Rizal Ganiem, Bachti Alisjahbana, Bachti Alisjahbana, Todia P. Setiabudiawan, Arjan van Laarhoven, Reinout van Crevel, Vinod Kumar, Vinod Kumar

    Published 2025-02-01
    Subjects: “…whole genome sequencing…”
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  6. 106
    Whole genomic analysis uncovers high genetic diversity of rifampicin-resistant Mycobacterium tuberculosis strains in Botswana

    Whole genomic analysis uncovers high genetic diversity of rifampicin-resistant Mycobacterium tuberculosis strains in Botswana by Tuelo Mogashoa, Tuelo Mogashoa, Johannes Loubser, Ontlametse T. Choga, Ontlametse T. Choga, Justice Tresor Ngom, Wonderful T. Choga, Wonderful T. Choga, Mpaphi B. Mbulawa, Tuduetso Molefi, One Stephen, Topo Makhondo, Kedumetse Seru, Patience Motshosi, Boitumelo Zuze, Joseph Makhema, Rosemary M. Musonda, Dimpho Otukile, Chawangwa Modongo, Botshelo T. Kgwaadira, Keabetswe Fane, Simani Gaseitsiwe, Rob M. Warren, Sikhulile Moyo, Sikhulile Moyo, Sikhulile Moyo, Sikhulile Moyo, Anzaan Dippenaar, Elizabeth M. Streicher

    Published 2025-02-01
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  7. 107
    MtCro: multi-task deep learning framework improves multi-trait genomic prediction of crops

    MtCro: multi-task deep learning framework improves multi-trait genomic prediction of crops by Dian Chao, Hao Wang, Fengqiang Wan, Shen Yan, Wei Fang, Yang Yang

    Published 2025-02-01
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  8. 108
    Genomic epidemiology and phenotypic characterization of Staphylococcus aureus isolated from atopic dermatitis patients in South China

    Genomic epidemiology and phenotypic characterization of Staphylococcus aureus isolated from atopic dermatitis patients in South China by Chao Yang, Xiaowei Chen, Min Li, Wenchang Yuan, Shunguang Li, Dexing Han, Junhui Feng, Haimin Luo, Minling Zheng, Jiaqi Liang, Cha Chen, Pinghua Qu, Song Li

    Published 2025-02-01
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  9. 109
    Enhancing diagnostic outcomes in kidney genetic disorders: the KidGen national kidney genomics study protocol

    Enhancing diagnostic outcomes in kidney genetic disorders: the KidGen national kidney genomics study protocol by Amali Mallawaarachchi, Hugh McCarthy, Thomas A. Forbes, Kushani Jayasinghe, Chirag Patel, Stephen I. Alexander, Tiffany Boughtwood, Jeffrey Braithwaite, Aron Chakera, Sam Crafter, Ira W. Deveson, Randall Faull, Trudie Harris, Lilian Johnstone, Matthew Jose, Anna Leaver, Melissa H. Little, Daniel MacArthur, Tessa Mattiske, Christine Mincham, Kathy Nicholls, Catherine Quinlan, Michael C. J. Quinn, Gopala Rangan, Jessica Ryan, Cas Simons, Ian Smyth, Madhivanan Sundaram, Peter Trnka, Laura Wedd, Erik Biros, Zornitza Stark, Andrew Mallett

    Published 2025-02-01
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  10. 110
    In defence of South Africa’s National Health Research Ethics Council guidelines on heritable human genome editing

    In defence of South Africa’s National Health Research Ethics Council guidelines on heritable human genome editing by Donrich Thaldar, Sheetal Soni, Larisse Prinsen, Ntokozo Mnyandu, Marietjie Botes, Julian Kinderlerer

    Published 2025-02-01
    Subjects: “…heritable human genome editing…”
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  11. 111
    SPAGRM: effectively controlling for sample relatedness in large-scale genome-wide association studies of longitudinal traits

    SPAGRM: effectively controlling for sample relatedness in large-scale genome-wide association studies of longitudinal traits by He Xu, Yuzhuo Ma, Lin-lin Xu, Yin Li, Yufei Liu, Ying Li, Xu-jie Zhou, Wei Zhou, Seunggeun Lee, Peipei Zhang, Weihua Yue, Wenjian Bi

    Published 2025-02-01
    “…Abstract Sample relatedness is a major confounder in genome-wide association studies (GWAS), potentially leading to inflated type I error rates if not appropriately controlled. …”
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  12. 112
    Genomic insights into a clinical Salmonella Typhimurium isolate carrying plasmid-mediated blaNDM-5

    Genomic insights into a clinical Salmonella Typhimurium isolate carrying plasmid-mediated blaNDM-5 by Fan Huang, Genglin Guo, Lu Feng, Tongbo Cai, Xu Huang

    Published 2025-01-01
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  13. 113
    Genetics : genes, genomes, and evolution /

    Genetics : genes, genomes, and evolution / by Dawes Hoang, Rachel, Okeke, Iruka N., 1970-

    Published 2017
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  14. 114
    Genetics : analysis of genes and genomes /

    Genetics : analysis of genes and genomes / by Hartl, Daniel L., Cochrane, Bruce

    Published 2019
    Table of Contents: “…Genes, genomes and genetic analysis -- DNA structure and genetic variation -- Transmission genetics : the principle of segregation -- The chromosomal basis of inheritance -- Genetic linkage and chromosome mapping -- Human karyotypes and chromosome behavior -- The genetics of complex characters -- Genetics of the bacteria and their viruses -- Molecular organization of chromosomes and genomes -- DNA replication and sequencing -- Mutation, repair, and recombination -- Molecular biology of gene expression -- Molecular mechanisms of gene regulation -- Manipulating genes and genomes -- Genetic control of development -- The genetics of cancer -- Extranuclear inheritance -- Genetics of populations -- Human evolution.…”
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  15. 115
    Whole Genome Sequencing Reveals Substantial Genetic Structure and Evidence of Local Adaptation in Alaskan Red King Crab

    Whole Genome Sequencing Reveals Substantial Genetic Structure and Evidence of Local Adaptation in Alaskan Red King Crab by Carl A. St. John, Laura E. Timm, Kristen M. Gruenthal, Wesley A. Larson

    Published 2025-01-01
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  16. 116
    Mapping genomic regions affecting sensitivity to bovine respiratory disease on chromosome X using selective DNA pooling

    Mapping genomic regions affecting sensitivity to bovine respiratory disease on chromosome X using selective DNA pooling by Ehud Lipkin, Maria Giuseppina Strillacci, Miri Cohen-Zinder, Harel Eitam, Moran Yishay, Morris Soller, Carlotta Ferrari, Alessandro Bagnato, Ariel Shabtay

    Published 2025-02-01
    “…The relatively large number of affecting regions and the candidate genes on the sex chromosome may explain part of the higher susceptibility of males and provide genomic and management targets for mitigating this disease.…”
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  17. 117
    The genome sequence of a beetle, Brachypterus glaber (Newman, 1834) [version 1; peer review: 2 approved]

    The genome sequence of a beetle, Brachypterus glaber (Newman, 1834) [version 1; peer review: 2 approved] by Michael F. Geiser, Talay Namintraporn, Freya Read, Maxwell V.L. Barclay

    Published 2025-01-01
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  18. 118
    Genomic characterization of foodborne Salmonella enterica and Escherichia coli isolates from Saboba district and Bolgatanga Municipality Ghana.

    Genomic characterization of foodborne Salmonella enterica and Escherichia coli isolates from Saboba district and Bolgatanga Municipality Ghana. by Gabriel Temitope Sunmonu, Frederick Adzitey, Erkison Ewomazino Odih, Boniface Awini Tibile, Rejoice Ekli, Martin Aduah, Anderson O Oaikhena, Olabisi C Akinlabi, Akebe Luther King Abia, Daniel Gyamfi Amoako, Iruka N Okeke

    Published 2025-01-01
    “…Salmonella enterica and Escherichia coli are well-known bacteria commonly associated with foodborne illnesses in humans and animals. Genomic characterization of these pathogens provides valuable insights into their evolution, virulence factors and resistance determinants. …”
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  19. 119
    Real-world enrollment for a prospective clinico-genomic database using a pragmatic technology-enabled platform

    Real-world enrollment for a prospective clinico-genomic database using a pragmatic technology-enabled platform by Alexia Exarchos, Ariel B. Bourla, Maneet Kaur, Katja Schulze, Sophia Maund, Yi Cao, Yihua Zhao, Elizabeth H. Williams, Sarah C. Gaffey, Richard Zuniga, Shaily Lakhanpal, Vladan Antic, Michelle Doral, Johanna Sy, Neal J. Meropol, Anne C. Chiang

    Published 2025-04-01
    “…Background: Discovery and incorporation of predictive and prognostic biomarkers enhance outcomes for patients with cancer. Clinico-genomic datasets, which retrospectively link real-world clinical data to tumor sequencing data, are important resources for biomarker research, which has historically relied on robust research infrastructures exclusive to large academic centers. …”
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  20. 120
    Uncovering the genetic basis of milk production traits in Mexican Holstein cattle based on individual markers and genomic windows.

    Uncovering the genetic basis of milk production traits in Mexican Holstein cattle based on individual markers and genomic windows. by José G Cortes-Hernández, Adriana García-Ruiz, Francisco Peñagaricano, Hugo H Montaldo, Felipe J Ruiz-López

    Published 2025-01-01
    “…The analysis included genotypic data on 7,713 cows and 577 sires, with information on 88,911 markers previously imputed and filtered by quality control. Genomic scans via the single-step genomic best linear unbiased prediction method were performed using BLUPF90 software. …”
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